Entry |
|
Symbol |
Mtr4
|
Name |
(RefSeq) exosome RNA helicase MTR4
|
KO |
|
Organism |
hamr Hetaerina americana (American ruby spot damselfly)
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Pathway |
|
Brite |
Enzymes [BR:hamr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139700269 (Mtr4)
Messenger RNA biogenesis [BR:hamr03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
139700269 (Mtr4)
Spliceosome [BR:hamr03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139700269 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
139700269 (Mtr4)
Ribosome biogenesis [BR:hamr03009]
Eukaryotic type
Pre-60S particles
Helicases
139700269 (Mtr4)
Transfer RNA biogenesis [BR:hamr03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
139700269 (Mtr4)
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SSDB |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
1035 aa
MADFVDELFSVFTEQSTPLKAFKSEGDDAGSSLSSDVPSVAVGIKRDLEDDEELSGKKLK
TESALDDVIIDESQPRIRVHTVETLEACTHEVAVPPDMDYQPLRAPPPGSKPAKQYPFLL
DPFQKEAILCIENSQSVLVSAHTSAGKTVVAEYAIAVSLHDKQRVIYTTPIKALSNQKYR
EFYEDFKDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDK
ERGYVWEETLILLPDNVRYVFLSATIPNATQFAEWVTHLHKQPCHVVYTEYRPVPLQHYI
FPAGGEGIHLVVDENGQFKEDNFNTAMAVLQNSGDASKGDTAILGKGRGGGNKSGNETNC
FKIVKMIMERNFAPVIVFSFSKKECEAYAVQMASLDFNNAEEKCLVDEVFNNAMDVLSEE
DRQLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGLNMPAR
TVLFTGARKFDGKDFRWLTSGEYIQMSGRAGRRGLDEKGIVILMVDEQMGSSVGKEIVRG
LPDPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNYAAIPNLYDKVKSIQNDHDS
IEIPREDEVASYYRIRTQLDNLSSQFQKYITQPQHIVPFLQPGRMVKIKNENDDFDWGIV
INFKKKVEKGKGRGPGSSTCTYVVDVLLHVAKGTGPTASASGGVSLQPKPAPKDETGEME
VVPVLLELVSQISSVRLYFPNDLRPADNRMSVLKTIKQVRKRFPKGVPLLDPEKDMRITN
DDFLSIVKRIRAFEERLYSHPLHGDPKLGVLYDLYSRKMKVGNELKGTKMELKKAKSLLQ
MDELKHRKRVLRRLGYCTASDVIEMKGRVACELSSADELLMTEMMFKGIFTDLTAAQSVA
LLSCFVCEEKSNDAPKISNELSGALRQMQDLARKIAQISKEAKLEINEDNYVDKFRPFLM
DIVFAWCQGASFAQLCKMTEVFEGNIIRCMRRLEEVLRQLCQAAKNIGNTELENKFSEGI
KLMKRDIVFAASLYL |
NT seq |
3108 nt +upstreamnt +downstreamnt
atggcagattttgttgatgaactcttcagtgtatttacggagcaaagtactccgttaaaa
gcttttaaaagtgaaggcgacgatgctggatcgtctctttcaagtgatgtgccatccgtg
gctgtcggcatcaagagagatcttgaggatgacgaagagctgtccggcaaaaagctaaaa
actgaatcagcattggacgatgtaattattgatgaatctcaacctcgtatcagagtccat
accgtggagactttagaagcatgtacacatgaagttgctgtgcctccggatatggattat
cagccattaagagcacctccccccggatccaagcctgctaagcagtatccgtttctttta
gatccgtttcaaaaggaggctattttgtgtattgaaaattcccagtctgtactggtatcc
gctcatacttctgctggaaaaacagttgtggctgagtatgcaattgcagtgtcccttcat
gacaaacagagggtaatttatacaactccaattaaagctctgagtaatcagaaatatcgt
gaattctatgaggattttaaagatgttggtcttataactggagatgtcacaattaatccc
tctgcaagttgtctcattatgacaactgagattttgagaaacatgctgtacagaggttca
gaagtgatgcgggaagtcggatgggtaatctttgatgagattcattacatgcgagacaaa
gaaagaggctacgtttgggaggaaacattgattctattgcctgacaatgtccgctatgtt
ttcctctcggccacaatacctaatgctacccagtttgctgagtgggttactcacctccac
aagcagccgtgccatgtggtatacacagagtacagaccagtaccgcttcagcactacata
tttcctgccggaggagaaggtatccatttagtagttgatgaaaatggtcagttcaaggaa
gataatttcaatacagcaatggcggtcttgcagaattcaggagatgcttccaagggtgac
acagcgatattaggaaagggccgtggaggtggcaacaagtcaggaaatgaaactaattgc
tttaaaatcgtgaagatgataatggaaaggaatttcgctccagtgatcgtcttcagcttc
agcaaaaaggaatgtgaagcatatgctgtgcaaatggcatctttggatttcaacaatgct
gaagaaaagtgtttggtagatgaggttttcaataatgcaatggatgttctatctgaagaa
gatcgtcaacttcctcaagttgagaatgttttgccattgttgagaagagggattggcatc
catcatggaggattgctgccaatcctcaaagagactatagagatcttattctcggaagga
ctgatcaaagccttatttgccacagaaacatttgcaatgggactcaacatgcctgcaagg
actgtacttttcacgggtgctcgtaaatttgatggcaaggacttcagatggttaacgtca
ggagagtacatacagatgtctggccgagccggaagaagaggcctggatgagaaaggaatt
gtcatattaatggttgatgagcaaatgggatctagtgttggaaaagaaatagttcgtgga
ctccccgatccgatcaattctgccttccatctaacttacaatatggtccttaatctactt
cgagtggaagagatcaatcctgaatatatgttggagaggtcatttttccagtttcagaac
tatgcagctatacccaatctgtatgacaaagtcaaatccatacaaaatgatcatgattcg
attgaaataccaagagaagacgaagtggcctcatattacagaattcgtactcagctggac
aatttgagttctcagtttcaaaaatacatcactcagcctcagcatatagttccattctta
caacctggcaggatggtaaagataaaaaatgaaaatgatgactttgattggggtattgtg
ataaacttcaagaagaaagttgagaaagggaaaggcagagggcctgggagctcaacttgt
acttacgtggtggatgtgctgcttcatgttgccaaaggaactggaccgacggcatctgcg
agtggcggagtaagtttacaacctaaacctgctccgaaagatgaaactggggagatggaa
gtggtgcctgtgttactcgagctggtcagccaaataagctctgttcggctttattttccc
aatgaccttcgacctgctgacaatcgaatgtctgttctcaaaaccattaagcaagtgcgt
aagcgatttcctaaaggggtcccgctgcttgatccagagaaggacatgaggataactaat
gatgacttcttgtccatcgtcaaaaggattcgtgcttttgaggagaggctgtattctcat
cctttgcatggtgaccccaagctgggtgttctgtatgacctctactccagaaagatgaag
gttgggaatgaactgaaaggaacaaaaatggaattaaaaaaagcaaaatccctccttcaa
atggatgagctcaagcacaggaagcgtgtgctgaggcgtcttggctattgcactgcttca
gatgttatagaaatgaaaggaagggtggcttgtgagcttagcagtgccgatgaactgttg
atgacagagatgatgttcaaggggatatttacagatttaacagctgcacaaagtgtggca
ttattaagctgttttgtttgtgaagaaaaaagcaacgacgctcccaaaatatccaatgaa
ctttccggtgctttgcgtcaaatgcaggatttagcacgaaagatagcacagatcagcaaa
gaagcaaagctggaaataaatgaagacaactatgttgataaatttagaccttttctcatg
gatatagtctttgcatggtgtcaaggtgcctcttttgcccagctctgtaaaatgactgaa
gtttttgaaggtaacataatcaggtgtatgagaaggttagaagaagtactacggcaactt
tgccaggctgcaaagaacattggcaacaccgaattggagaacaaattcagtgaagggatt
aagctcatgaagagagacattgtatttgcagccagtctttacttataa |