Hetaerina americana (American ruby spot damselfly): 139700374
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Entry
139700374 CDS
T10852
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Brite
KEGG Orthology (KO) [BR:
hamr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamr03019
]
139700374
Messenger RNA biogenesis [BR:
hamr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139700374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
139700374
NCBI-ProteinID:
XP_071455115
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MKTKHFKFPELCKKNNAQELAQCFSTDEKVVVISVFGKSPVTSCSSKATALDSVLGKPIF
RQQLDNEDIFEEDYLCEVEGYYDGNQRVIFLHLQGVFDAHILVKAYKWLAKDFDQKGYLM
VWSKLKYKYARALLFLFSVSHVLIVSHPKHTFDISYIQLFRALDAARQKAQPLLSEILRG
VHGLPRDWVLAARPCPPRVLFLFQSCPRVHTDNGGARAKPSGAKQQRQKNVAGASGSKSS
DGSHAASKSVKKLEHALEDQIYHILRKTRVITNVSSNSLFAIPANQEFVFVNTQSSSSLE
FVEDQVSQMIQSMVQFCDRPSNGMEENGGDYFAAVPSFNLQENQVPHGHTFQKFIHQHIA
QAFAKGFDDNVGRHTAPPMFEIPTAGLWFEVAAKVFNFFMNEPSEKEYKTKLMLSCLHTL
LDTDVRFSENRCGKVFPLAVATYQENLPPHYTKDYHETRLAHAASVLATHARGPMFEQYA
TQLEEECEHYWRSGHQMCEVLSLTGNPCTNPLHRTPLGFEGEDAKEEGEDGAAGSPLDGE
GDGRGVDGGGDNDGERDENETREGEDEEWVEERRSSRAMQSSILRSTASREGFEMSRHID
VERKSLPVLPHSSGVRYVSTCNCGRQQAGREDPFSVKVANWEFYDTIAADCCSDLESVTF
PVFQPSTSEFRAAQLFTKQSGAKKDIGSTRAIDGGRESLAGTQFGNTQGFSFAFLSNPSE
RLSDVAGDEMTAAGPGAAGGVEGVGAEDGELEIEEGGGGEGSRGEEGAGVDGGATEDALD
PSADDVERAVQQPNEDEEVIIKVVGTEYDSMRGDKSHLVRQPSTTEYLPGMLHSDSPCGL
LPQFPSWSLVCLGPSSLYSHNLGLQDQPGLLTGSSYLLPWDVTVRLEPTSLTSQHLSEKV
SQKKYDRWPSVGDASNYGPGGMAGSRKQSYFLRNSKKGRKDLSEFVVKIFVGVEYECPRG
HRFMCSGPDRVLKTTNLGLVKDNGNRVTSGDMPLHFPCPCRNTKPLMAQLMRLHVVTPKA
PVHVTLNPRVQPAPGTPIYITGSQEPLRLSQSAYWVLRLPFVYFGEQGPYLPPKEPPSYG
RLLAGVYGITEMPIISE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaagcactttaagtttcctgagttgtgtaaaaagaacaatgcccaagaatta
gcacagtgcttttcaactgatgaaaaggtagtagtaatatcggtttttggaaagagcccc
gttacttcatgcagctccaaagccactgctttagacagtgtactcggtaaaccaatattt
cgtcaacagctcgataatgaagatatttttgaagaagactacttgtgtgaagtggaaggg
tactatgatggcaaccagagagttatttttctgcatttgcaaggggtattcgatgctcat
attttagtgaaggcatacaaatggctagcgaaagattttgaccaaaagggttaccttatg
gtctggtcaaaattaaagtacaagtatgccagagctctcttattccttttctcagtgtca
catgtgctgattgtatcccatccaaagcacacatttgacattagctacatacaactattc
cgtgccttggatgcagcgaggcaaaaggctcagccattgttgagtgagattctccgtggc
gtccatggcttaccaagagactgggtgcttgcggcaaggccatgccccccccgagtcctt
ttcctcttccagtcctgcccccgtgtgcacactgacaatggtggtgccagagcaaagcca
agtggtgccaaacagcagcggcagaagaatgtggccggtgcaagtgggagtaagagtagt
gatggatcccatgccgcatccaagtctgtgaagaagctcgagcatgccttagaagaccag
atataccacattttgaggaagacaagggtgatcactaatgtgagctccaattctctcttt
gccattcctgccaatcaggagtttgtttttgtaaatacgcaatcgtcatcttcgctagaa
tttgtggaggatcaggtatctcaaatgatacaatccatggtgcagttttgtgatcgtccc
tctaatgggatggaagaaaatggtggtgattactttgctgctgtcccatcatttaacttg
caggaaaaccaagttcctcatgggcatactttccagaaatttattcaccagcacattgcc
caagcttttgccaaaggatttgatgataatgttggacgtcacactgcaccacccatgttt
gagattccaacagctgggctatggtttgaggtagctgcgaaagtatttaattttttcatg
aacgagccgagtgagaaggaatataaaacaaaattgatgttgagctgcttgcatacctta
cttgacacagatgtgcggttcagtgaaaatcgctgtggcaaagtcttcccactggctgtg
gctacgtaccaggaaaatctgccaccacattacacaaaggactatcatgaaacacgtttg
gctcatgcagcttccgtactggccacacatgcccgaggccccatgtttgaacagtatgcc
actcaactggaagaggagtgtgagcattattggagatctggccaccagatgtgtgaggtt
ctcagcttgactggcaatccgtgcaccaatcccctgcacaggacgccattgggttttgaa
ggagaggatgccaaagaggaaggggaggatggagctgcgggcagtcctttggatggagag
ggcgatggcaggggggtggatggaggaggtgataatgacggggagagggatgaaaatgag
acacgtgaaggggaggacgaggaatgggttgaagagaggaggtcttccagggctatgcag
tcatccattttgaggtccacagcttcaagggaaggatttgaaatgtctcgtcatattgat
gtagagcggaaatctttgccagtgctcccgcattccagtggggtccgctacgtgtcaact
tgcaattgcggtaggcagcaagctggccgtgaagaccccttttcagttaaagtagcaaac
tgggaattttatgacaccattgctgctgattgctgttccgatttggagagtgtgaccttt
ccagtgttccagcccagcacatcagagttcagagctgctcagttgttcacgaagcagagt
ggagccaagaaggacattggatcaacgagggcaatagatgggggaagagaatcattagca
ggaactcagtttggaaatacacaaggatttagttttgcttttctctccaacccctcggag
agactcagtgatgttgcaggggatgaaatgacggctgcaggtccaggagcggcagggggg
gttgaaggggtgggtgcagaggatggggagttggagattgaggaggggggaggaggagaa
gggagcaggggagaggagggtgcaggggtggacggaggtgccaccgaggatgctttggac
ccttcagctgatgatgtggagagagcggtacagcagccgaatgaagacgaagaagtcatc
atcaaggttgtgggaactgaatacgatagcatgagaggagacaaaagtcatctagtgagg
cagccgtccaccactgaataccttccggggatgcttcactccgactccccatgtggactc
cttccgcagtttccctcgtggtcccttgtctgtctcggaccgtcatccctctactctcac
aacctcggactacaggaccaaccaggccttctcaccggatcttcttatctcctcccttgg
gatgttacggtccggttagagcccacgtcacttacttcccagcatctctccgagaaggtg
tctcagaaaaagtatgaccgatggccttctgtgggcgatgcatcaaactatggtccaggg
ggaatggcgggcagcagaaagcaatcatatttcctgagaaattcaaaaaaaggacggaaa
gatctctcagagtttgtggtgaaaatctttgtgggagtcgagtatgagtgtcccagaggt
catcgtttcatgtgctctggacctgatagggtcctcaaaactactaatcttggattagtc
aaggacaatggcaatagggtgactagtggcgatatgccacttcacttcccttgcccctgt
cggaataccaaacctctaatggctcagcttatgcggttgcatgttgtcactccaaaggcc
ccggttcacgtgactctgaatccgagagtgcaacctgcccctggcactcccatatacatc
acgggatctcaagagccccttcgactctctcagtccgcttactgggttcttcgactgccg
tttgtgtattttggagagcagggaccatatcttccaccaaaggagcctccgagctatggg
cggttgctggcaggcgtctatggaatcacagaaatgcctatcatttctgaatga
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