Halomonas sp. MS1: NF683_00175
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Entry
NF683_00175 CDS
T09972
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
hams
Halomonas sp. MS1
Pathway
hams03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NF683_00175 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hams03032
]
NF683_00175 (dnaB)
Enzymes [BR:
hams01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NF683_00175 (dnaB)
DNA replication proteins [BR:
hams03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NF683_00175 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
nSTAND3
AAA_22
MMR_HSR1
GvpD_P-loop
KTI12
AAA_16
DUF8012
AAA_19
nSTAND6
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UTD55669
LinkDB
All DBs
Position
complement(33926..35314)
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AA seq
462 aa
AA seq
DB search
MQDQPSADQETAAIKLPPHSLEAEQSVLGGLMLDNQAWDNVSERLVADDFYRYEHRLVFN
VMIHLAESGQPLDVITLSEALEARDQLDTVGGLAFLAELARNTPSASNIRAYADIVRERA
TLRKLIRAANQIADGAFSPQGRPADELLNEAERLVFQIAEERPKTGGPIGMSELLTKAVD
RIDELFNLKGEMTGLSSGFRDLDEMTSGLQPSDLVIIAGRPSMGKTTFAMNLVEHAVIAS
DKPVMVFSMEMPAESLMLRMLSSLGRIDQTRVRSGQLEDEDWPRLTSAVNLLKDKQLFID
DTAALSPNEMRSRLRRVVREHGNMALIMIDYLQLMQIPGFSENRTGEISEISRSLKGLAK
EFQCPVVALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIAFVYRDEVYNPDNPDNQG
IAELIIGKQRNGPIGTVHMAFIGKYTRFEDLAPDSYGEAFGD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccagccttctgctgatcaggaaacggcagcgataaagctgccgccgcactct
cttgaggcggagcagtcggtgctaggtgggctaatgttggataatcaggcctgggacaat
gtctcggaacggttggtggcggatgatttttaccgctatgagcatcgcttggtattcaat
gtgatgattcatttggccgaatccgggcagccgctggacgttataacgctgtcagaggcg
ttagaagcgcgtgatcagttggatacggtgggtggtttggcattcttagctgagctggct
cgcaatacgccttctgccagtaatattcgtgcttatgcggatatcgttcgcgagcgggca
acgctgcgtaaattaatccgtgcggccaatcaaattgctgacggagcgttttcgccccag
gggcggcctgctgatgagttgctgaatgaagcggagcgattagtctttcagattgccgaa
gagcggccgaaaacgggcggtcctatcggcatgagtgaactgctaaccaaagccgttgat
cgtattgatgagctgttcaatctaaagggtgaaatgacagggctctcctcggggtttcgt
gacctcgatgaaatgacctcaggcttacagccctcagatttggtgattatcgcgggccgc
ccgtcaatgggtaaaaccacgtttgccatgaacttggtggagcacgcggttattgctagc
gataagccggtgatggtgttctccatggagatgcctgcagaatctctgatgctacgtatg
ctctcttcgttgggtcggattgatcaaacccgtgtgcgttcggggcagttggaagatgaa
gattggccgcgactgacatcagcggtcaacctgctcaaagacaagcagctatttatcgat
gatactgcggcgctttcgcctaatgaaatgcgctcacgcctgcgtagagtggtgcgggag
cacggcaatatggcgctgatcatgattgactatctgcagttaatgcagatccccggcttt
tctgaaaaccgtaccggtgagatatcggagatatcccgctcgctgaaagggctagcaaaa
gagtttcaatgtcctgttgtagcactttcacagcttaaccgttcgttggagcagcgcccc
aataagcgtcccgtcatgtcggatctgcgggaatcgggagcgattgagcaggatgccgac
gtcattgcgtttgtttaccgagatgaggtgtataaccctgacaatcctgacaaccaaggg
attgccgagctgattataggtaaacagcgtaacgggcctatcggtacggtacatatggcc
tttattggtaaatacacacgcttcgaagaccttgcgcccgatagctatggcgaagcgttc
ggcgattaa
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