Halomonas sp. MS1: NF683_00445
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Entry
NF683_00445 CDS
T09972
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hams
Halomonas sp. MS1
Pathway
hams03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NF683_00445 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_00445 (recC)
Enzymes [BR:
hams01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NF683_00445 (recC)
DNA repair and recombination proteins [BR:
hams03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF683_00445 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UTD55719
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All DBs
Position
97041..100667
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AA seq
1208 aa
AA seq
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MSANSHCSPTPFSPTSLTPGFMVVHANRLEDLRGLAVQWMRLHPLGPLENETILVQSNGI
GQWLKLALAEDPENGGAGIAAALDVMLPARFLWQAYRTVLTHVDQDGDAVPETSPFDKSR
LVWRLLRLLPTLAGQEVFAPLAQFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWA
NGDDVLITARGEPRPLEEHQRWQPALWRILREDVAATQGDAGINSSRAQVHRRFLKATEQ
LEGQPCPRGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDL
LRANRYRQRRKTGMPEALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDSGN
YQTLFEQQALRIDMFEPFNGVDRDCLLSQLQDDIRELRPVAETQTHWPALSSADDSMVFH
IAHGPQREVEILHDQLLAAFSADPDLRPRDIIVMVPDIDRYAPHIAAVFGQLPNDDPRHI
PYTLSDQASRHRLPLMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLEERDLPVLER
WMEGAGIRWGLNAKQRQTLELPGGLSQNTWAFGLRRLLLGYTVGEGHAWQGIEPFDDIGG
LEAGLAGPLATLLEKLEETWETFCQPTDAANWVARLRTLLETFFLTDDAQESVMLTKLEN
GLQQMLESSEEAQLTEPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKR
VCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWVGR
SQIDNTPLPPSVLVGQLRDHLEAGWQIENGTPLLEALTTEHPLQPFSRAYFASNPQASRL
FTYAHEWREVHAPRTPQAAQPTLSPPENIPTSLTLGQLGQFLREPIRAFFNTRLGVYFEQ
EAIAELDEEPFALDGLQNWQLQDQLIAAQRHAIDRGEPRIEALHTALERFQGQGVLAMGA
FGERMRNALAEPMEALFSDYEEALGAWPIALGDPAAIHLEGSNGITLEDWLGELRQDDVG
NRCRLLLLSSSLVKNSKYQWHLLLRHWVAHLAGNLSGPMTTQLLSKAGNITLEPIAADTA
RAHLETQLSAWQHGLEVPLPLAPQAAFAWLTKLGTPDIAIEKGRESDAYAAAEKVYESGF
KTTGEADQSPYLGHQWHRFERLFFDRTANEEHTFAELTEALYAPLFNAVKGNAKKDNGNK
DNAKKAAS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaattcacactgctcaccaacgccattctcgccaacgtcgcttacccctggc
tttatggtggtgcacgctaaccgcctggaagacttgcgcgggctggcggtgcagtggatg
cgcctgcacccgttgggaccgttggaaaacgagaccattctggtgcagagcaacggtatt
gggcagtggttaaagttagcgttggcggaagacccagagaatggcggcgcaggcatcgcc
gccgcgctggatgtcatgctgcctgcgcggtttctatggcaggcctaccgcacggtgctc
acccatgttgatcaagatggcgacgcggtgcctgaaacctcgccgtttgataaatcgcgc
ttggtatggcggctactgcgcctactgcccacgctagcggggcaagaagtgttcgcgccg
ctggcgcagttcttggaagtcgaccgcgaccagcgcaagcactaccaactggccgaacgg
ctggcggatttgttcgaccagtatcaggtctaccgcgctgactggctggatgcctgggcc
aacggtgatgacgtgctaattaccgctcggggcgagccccgcccgctggaagagcaccag
cgctggcagcccgcgctatggcgtattctgcgcgaagatgttgccgccacccaaggtgat
gcaggcatcaacagtagccgtgcccaggtgcatcggcgctttttgaaagcgactgaacag
ctggaaggccagccctgcccacgcggtttgcctcggcggctgattatttttggtatttca
tcgctgccccaacaaaccctggaagccctggcggcgctctctcgctgctgccaaatcgtg
ctgtgtgtgcacaacccctgccagttctactgggcagatatcatcgagcacaaagattta
ctgcgcgccaaccgctaccgccagcggcgtaaaaccggcatgcccgaagcgttggatgta
ctgggcactggcgacgccgacgatgccctgcacctgcacgcccagccgctactcgccgcc
tggggcaagcagggccgcgactacctgcgcctgctggatgaacacgacgattcgggcaac
taccaaaccctgtttgagcagcaagcgctacgcattgatatgttcgagccgtttaacggt
gttgatcgcgactgcctgctcagccaactgcaagatgatattcgcgagctgcgccccgtg
gcggaaacccaaacccactggccggcgctaagctcggccgatgactccatggtgtttcat
attgcccatggccctcagcgggaagttgagattctccacgaccagttgctggccgccttt
agcgccgaccccgacctgcgcccgcgggatattatcgtcatggtgccagatatcgaccgc
tacgcgccgcatatcgccgcagtgtttggccaactaccaaacgacgacccacgacatatt
ccctatacgctttccgaccaagccagccgccaccgcctgccactaatgattgccctggaa
aagctgctgcgcctacctgagctgcgcctttcggtcagcgacttactggatctgctcgat
gtacccgctctgcgccagcgctttgggctggaagagcgcgacctaccggtactcgagcgc
tggatggagggtgcaggcattcgttgggggctgaatgccaagcagcgccagacgcttgag
ctacccggcgggttaagccaaaacacctgggcgtttggcctgcgccgcttgctgctgggc
tacaccgtgggcgaaggccacgcttggcaaggaatcgagccgtttgacgatatcggcggg
ctggaagcgggccttgccgggccgttagccaccttgttggaaaagctcgaagagacctgg
gaaaccttctgccagcccaccgatgcggccaactgggtagcgcgactacgcacactgctg
gaaaccttcttcctgaccgacgacgcccaagaaagcgtaatgctcaccaagctggaaaac
ggtttgcagcaaatgctggaaagcagcgaggaagcccagttaaccgaaccgctgccgctc
tccatggtgcgcgaacactggctggcacagattgatgaacacagcctttcccagcgcttt
ctagccggtgcagtcaacttcgccacgctaatgcccatgcgcgccattccgtttaagcgc
gtgtgcctgctgggcatgaacgacggtgagtatccccgctctcagccaccgctagatttt
gatttgatgggtagcgactaccgccccggtgaccgttcccgtcgggaagatgaccgctac
ctgtttttggaagcgctgctctccgcccgcgaccagctctacataagctgggtaggcaga
agccaaatcgacaacaccccgctaccgccttcggtactggtcggccaactgcgtgaccac
ctggaagcaggctggcaaatcgagaacggcacgccgctgctggaagcgctaactaccgag
cacccgctgcagccgtttagccgcgcttattttgctagcaacccgcaagcctcgcgactg
tttacctatgcacatgaatggcgcgaggtgcacgcaccgcgcacacctcaagctgcccaa
ccgacactttccccaccggaaaacatcccgaccagcctgacgcttggccagttaggtcaa
ttcctgcgcgagccgatacgcgccttcttcaatacccggctgggggtgtatttcgagcag
gaagcgattgccgagctggacgaagaaccgttcgccctggatggcctgcaaaactggcag
ctgcaagaccaactgatcgccgcccagcgccacgccattgatcgcggcgagccacgcatt
gaagcactgcacacagcccttgagcgttttcagggccaaggcgtattggccatgggtgcc
tttggcgagcgcatgcgcaatgccttagcagaacccatggaagctctgttcagcgactac
gaagaagccctgggcgcttggccgattgcgctaggtgacccagcagccattcacctggaa
ggtagtaacggtattacgttggaagattggctgggcgagctacgccaggatgatgtgggc
aaccgctgccgcctgttattactcagcagtagcctggtcaagaacagcaagtaccagtgg
catctgctgctacgccactgggttgcccacctagcgggtaacctcagcggcccgatgacc
acccaactgctttccaaagcaggcaatatcaccctggagcctatcgctgccgacaccgcc
cgcgcccacctggaaacccaactaagcgcctggcaacacggtctggaagtgccgcttcca
ctagccccccaggctgcctttgcgtggctgacaaaactgggcacacctgacattgcgatt
gaaaaaggcagggaaagcgacgcctacgccgcggccgaaaaagtctatgagagcggattt
aaaaccaccggcgaagccgatcaaagcccttacctcggccaccaatggcaccgcttcgag
cggctgtttttcgaccgcaccgccaacgaagagcacacctttgccgaactcacggaagcg
ctgtacgccccgctgttcaacgccgtgaaaggtaatgcgaagaaagataatgggaacaaa
gataacgcgaagaaagcggcatcgtaa
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