Halomonas sp. MS1: NF683_01190
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Entry
NF683_01190 CDS
T09972
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_01190
DNA repair and recombination proteins [BR:
hams03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF683_01190
Archaeal homologous recombinant proteins
NF683_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
TIMP
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
UTD55863
LinkDB
All DBs
Position
complement(246797..249862)
Genome browser
AA seq
1021 aa
AA seq
DB search
MTPLTLTMQAFGPFAGSETIDFTALGKSPLFLINGPTGAGKSSILDAICFALYGQTTGND
RDAGQMRCDQAAATLLTEVSLDFRLRDSAYRVRRVPQQERPKATGEGTTTQSAEAQLWRL
TPEGDEDECLVARKITDANSQLHALIGLDANQFRQVMVLPQGKFRELLLAESKDREKIFS
QLFQTQIFQRIEERLRTQANQIERAVNDHRQHISGILAGGELESEAALAQEVEALTPQVG
QARQRFETAQQQRRSAEQRRDEAQALQRQFEARDSLAAEKARHLEQQAQITAFQDRLTQS
DHAQALRPYSAALVQAQQALTTAQAEQRQADAALTTQRTNTEQAKRTFEAARQRQTELPA
LRERHRQLGEFIHKSQQLSELEARWQAAQTAWQQADDILKRDEAQLDGIRQQGEALSVTL
EQLQTESQQLASAPAELSRHESLLAQRQELEALMRQGRELVAQQQQATAALNGRRSEAEQ
AKRHTTEQEMRWHQGQAALLALTLEEDAPCPVCGSLEHPSPAVQHADLVTQAQVEEARSV
EEQARHAFQTAERQAHQLAQQLSYNAEQAQRLSHQLGDWASQPPFELQQACEQLRRQVAR
RQHVESEINRQSAARDELRSGWGTLDKQLKAQRPVVEKAKEEALRLESQRDQLSQSLPED
ARNPLAMRQTLTELDSQIAELEQAWERAQQVLSTSQTQQARAEEQLRNANQQLARNQQAL
EQAQAEWQTALQASSFESEAAYQAAQLEDSQRQDLARHVEAYQRRLAELDGALHNYHAQL
AEKTPPDLAALATLTEAAQAEEHTQLDAWRALDGRLTTLQGVRQKLTAARAAQAELEAQY
RVWGTLSEVANGRTGNRISLQRFVLGVLLDDVLIQASERLVRMSRGRYQLVRREDPSKGN
KASGLELDVADTYTGKSRSVATLSGGESFMAALALALGLSDVVQAYAGGIQLDTLFIDEG
FGSLDQDALDQAIAMLSELQMGGRMIGIISHVSELKEQMPVRVEVRASRLGSSVEVKGAL
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttaacgctcactatgcaagcgtttggcccctttgctggcagcgaaacgatc
gactttactgcgctgggcaaaagcccgttgtttctgattaacggccccacgggcgcaggg
aaaagctcgatattagatgctatctgttttgcgctttacggccaaaccaccggtaatgac
cgagatgccggccaaatgcgctgcgaccaggctgctgctaccttgttgaccgaggtgagc
ttggattttcgcctgcgcgatagtgcttaccgagtgcgccgggtgccccagcaggagcgc
cccaaggcgactggtgaaggcacaaccacacaaagtgctgaagcccagctgtggcggctg
accccggaaggtgatgaggatgaatgtttggtggcgcgtaagatcactgatgccaacagc
caactgcacgcgttaataggtctggatgctaatcaatttcgccaagtaatggtgctgccc
caggggaagtttcgtgaactgctgttagcggaatcgaaagaccgcgagaagattttttcg
cagctatttcaaacccagatttttcagcgcattgaagagcgcctgcgtacccaggcgaat
caaatagagcgagcggtgaatgatcaccgccagcatatcagcggcattttggccgggggc
gagctggaaagcgaagcggcattggcgcaagaagtagaggcgctaaccccgcaagtaggg
caagcgcgtcagcgttttgaaaccgctcagcagcagcgccgtagtgctgaacagcgacga
gatgaagcccaagcgttacagcgccaatttgaagcgcgggacagcctcgccgcagagaaa
gcacgccaccttgagcagcaggcgcaaataacggcctttcaggaccgcttgacccaaagc
gaccacgctcaagcgctacgaccttacagtgctgcgttagtccaggcgcagcaggcactc
actaccgcccaagcagagcagcggcaagccgatgccgcgcttacgacccagcgtacgaat
actgaacaagccaagcgtacctttgaagcggcacgccagcgccagaccgaactacctgca
ctgcgcgagcgccatcgtcagttgggcgagtttatccacaaaagccagcagttaagtgag
cttgaagcgcgctggcaagcggcgcaaaccgcttggcagcaagccgatgacatacttaag
cgtgatgaagctcagttagacggtattcgccagcaaggtgaagcactaagcgttactctt
gagcagctgcaaacggaaagtcagcagttggccagcgcccctgcagagctgagccgccat
gagagcctgctagctcagcggcaggagttggaggcgttgatgcggcaggggcgtgaactt
gtcgctcaacaacagcaggcaacggcggcgcttaacggtcggcgcagcgaagcagaacag
gctaagcgccacacaactgagcaagagatgcgctggcaccaagggcaagccgcactgtta
gcgctcaccctggaagaggacgcgccttgcccggtgtgtggcagccttgaacacccatcc
ccagcggttcagcatgctgatctcgttacccaagcgcaggtagaagaagcccgctcagtt
gaggagcaggcccgccacgccttccaaaccgccgagcgtcaggctcaccagttagcacag
cagcttagctacaacgctgagcaggcgcagcgccttagtcaccagttaggcgattgggcc
agccaaccgccgtttgagctgcaacaggcctgcgaacaattgcgccgccaagtcgcgcgt
cggcagcatgtcgagagtgagattaaccggcaaagcgctgcccgtgacgagctacgtagc
ggctggggcacgctggacaaacagctcaaagcccagcggcctgtggttgaaaaggccaaa
gaggaggcgttacggctagagagccagcgcgatcaattaagccaatcactgccagaagat
gcccgtaacccgttggccatgcgtcaaacgctcactgaacttgatagccaaattgctgag
cttgaacaggcctgggagcgagcacaacaggtgctttcgacgagccagacccagcaggcg
cgggcagaagagcagctgcgcaacgcaaaccagcagttggcgcgtaaccagcaagcgctt
gagcaggcccaggctgagtggcaaacggcgctacaagctagttcatttgaaagtgaagct
gcttatcaggcggctcagctagaggatagccaacggcaagacctggctcgccacgtagag
gcgtatcaacgccggttggctgagcttgacggcgcgctacacaattaccacgcccagctg
gccgaaaaaacgccgccagatctcgccgcactcgccacactcaccgaagccgcccaagcg
gaggagcacactcaactcgatgcgtggcgggcgctagatgggcggttaactacgttgcag
ggagttcgccagaaacttaccgctgcccgtgcggcccaggccgagcttgaagcccagtat
cgggtgtgggggacattaagcgaagtggctaatgggcgcaccggtaatcgcattagcttg
cagcggtttgtgctaggagtgctgctggacgacgtactgatccaagcgtctgaacggctg
gtgcgtatgagtcgcgggcgctaccagttggtacgacgcgaagacccatccaagggcaac
aaagcctcgggattggagttggatgtggccgatacctacaccggcaagagccgttcggta
gcgacgctttccggcggtgagtcgtttatggcggccttggcgttggcgctagggctttct
gacgtggtgcaggcctacgcaggcggtattcagttggatacgctatttattgacgagggc
tttggcagccttgatcaggatgcattagaccaagcaattgctatgctcagtgagttacaa
atgggcgggcgaatgatcgggattatctctcatgtcagcgaactcaaagagcaaatgcct
gtccgtgttgaagtgcgtgccagccgacttggtagctcggtggaggtgaagggcgcgctt
ctttaa
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