Halomonas sp. MS1: NF683_02050
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Entry
NF683_02050 CDS
T09972
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hams03021
]
NF683_02050 (rpoS)
Transcription machinery [BR:
hams03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF683_02050 (rpoS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
FlaC_arch
Motif
Other DBs
NCBI-ProteinID:
UTD56027
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Position
complement(415060..416031)
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AA seq
323 aa
AA seq
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MSMLEKDLQEVDLDAVEEALDSVDDVSAEEDAFEKALSRDERQSTQSLDATQIYLNEIGF
SPLLTPEEEVYYGRLARKGDPLGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLGL
IRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELTQ
KLDHEATAEEIADHLDKPVETVKKMLGLNERVSSVDYPMGGESDKPLIDTLTDDDVLGPE
ACLVDGDVREHVDHWLDELSDKQREVVVRRFGLRGHESATLEEVGAEIGLTRERVRQIQV
EALKKLRRSLEKQGLSLNAIFES
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctggagaaggatctacaggaggttgacctggacgctgttgaagaggcgctg
gatagtgttgatgatgtctccgcggaggaagacgcctttgaaaaagcgttgagccgtgat
gagcgtcaatcgactcaaagcttggacgctacacaaatctatctcaatgaaattggtttt
tcgccgttattaacgccggaagaagaggtctactacggccgtttagcgcgtaaaggtgac
ccgcttggacggtcaaggatgatcgagtctaaccttcgcctggttgttaaaatcgccagg
cgctaccttaatcgggggcttacgctgcttgacttgattgaggagggtaaccttgggcta
atccgggcggtggaaaagtttgatcctgagcgagggttccgcttttctacctatgccacg
tggtggattcgacaaaccattgagcgtgcgctaatgaatcaaacgcgcaccattcgtttg
ccgatccatgtggttaaagagctaaatatttacctgcgtgcagcgcgtgagctgacccaa
aagcttgatcatgaagcaacagcagaagagatcgccgatcatctcgacaagccagtagaa
acggttaagaagatgcttgggcttaatgagcgcgtctcctcggtagattacccaatgggt
ggcgaaagcgataagccgttaatcgacaccttaaccgacgacgatgtgctagggccggaa
gcatgcttagtggatggcgatgtgcgtgagcacgtagaccactggttggatgagctaagt
gacaaacagcgagaagtggttgtacgccgctttggtttgcgaggtcatgagtccgctacg
ttggaagaagttggtgcagaaattggcttaactcgcgaacgtgttaggcaaattcaagta
gaagcactaaagaaactgcgccgctcattggaaaaacagggcctttctcttaacgctatt
ttcgagagctaa
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