Halomonas sp. MS1: NF683_02325
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Entry
NF683_02325 CDS
T09972
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hams03009
]
NF683_02325
Ribosome biogenesis [BR:
hams03009
]
Prokaryotic type
ribosomal protein modification factors
NF683_02325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
UTD56080
LinkDB
All DBs
Position
complement(469122..471305)
Genome browser
AA seq
727 aa
AA seq
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MEIKVNYLDNLRLEAKFDDFTVISDQPIRYKGDGSAPGPFDYFLASSAMCAAYFVKVYCN
ARDIPTENIRLSQNNIVDPEDRYKQIFKIQVELPEDISEKDRQGILRSIDRCTVKKVVQT
GPDFQIETVENIDEDAQALLMGAPEGSATYIPGKDLPLEQTIANMSAMLADLGMKIEIAS
WRNIVPHVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLSCNFFYNDQYFGEEI
ANSDFVHYPNEKWFKPGPNDKLPAEILDDHCRDIYNPEGELCGSHLIDTNSGREDRGIVS
LPFVRQSDGETVYFPSNLIENLFLSNGMSAGNTLVEAQVQCLSEIFERAVKREILEQELA
LPDVPQDVLAKYPSIVEGINALEAQGFPVLVKDASMGGQFPVMCVTLMNPRTGGVFASFG
AHPSFEVALERSLTELLQGRSFEGLNDLPLPTFNSQTVSEPNNFVEHFIDSVGVVSWRFF
SAKPDFEFSEWDFSGSNEEEAATLFGIFEELGAEVYMAVHEDLGAPVCRILVPGYSEVYP
IEDLIWDNTNKALDYRKDILNLHRLDDAQLTDLVERLEESQMDDHADIITLIGIEFDENT
VWGQLTILELKLLVYLALQRHEEALDCVQMFLQYNDNTVERGLFYQAVNAVLEIVLDGEL
ELEDYLHNFQRMFGEATMAAVVGSVSGEVRFHGLTPTNMQLEGLERHQRLIESYKKLHAA
RAAKAGI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaactatctcgacaacctccgcttagaggccaagttcgacgatttt
acggttatctccgaccagccgattcgctacaaaggcgacggctcggcacctgggccgttt
gactactttctagcgtcgtctgccatgtgtgcggcctactttgtaaaggtttactgcaac
gcccgcgatattcctaccgaaaatattcgcctgtcacagaacaacatcgttgacccagaa
gaccgctataagcagatcttcaaaatccaggtcgagttgccggaagatatttctgaaaaa
gatcgccagggtattctgcgttccatcgatcgctgcacggttaagaaggtggttcaaacc
ggccctgatttccagatcgagacggtagaaaacatcgacgaggacgcccaggcgctgctg
atgggagcgccggagggcagtgctacttatattccaggcaaagacctgccattagaacaa
accatcgccaatatgagcgcgatgctggctgacctgggcatgaagatagagatcgcctcc
tggcgcaatatcgtgccccacgtctggtcactgcatattcgcgatgcggcttcaccgatg
tgtttcaccaatggcaaaggggctaccaaagagagcgccctgtgttcggcgctgggcgag
tttattgagcgcttaagctgtaacttcttctataacgatcagtactttggtgaagagatt
gccaacagtgattttgttcactaccccaatgaaaagtggttcaagccggggccgaacgat
aaacttcccgcagaaattctcgacgaccattgtcgcgatatttataaccctgaaggcgag
ctgtgtggctcacatctgatcgataccaactctggccgtgaagataggggcattgtctca
ctgccgtttgtgcgccagtccgacggtgaaacggtctacttcccctccaatctgatcgaa
aacctgttcctcagtaacggtatgagcgcgggcaataccctggtagaagcccaggtgcag
tgcctgtcggaaattttcgagcgggcggtgaagcgtgaaatcctcgagcaggagttagct
ctgccggatgtaccgcaggacgtgctagccaagtatccaagtatcgtagaaggcattaac
gccctggaagcccagggttttcccgtgttggtcaaagatgcctctatgggcgggcagttc
ccggtgatgtgcgtcaccttaatgaacccgcgtactggcggcgtatttgcttcgtttggc
gcgcacccgagttttgaagtggcgctggagcgcagcctaactgagcttctgcaggggcgc
agtttcgaagggttgaacgatctgccgctgccgacgtttaactcgcaaaccgtttctgaa
cccaacaacttcgttgagcattttatcgactcggtgggcgtcgtttcctggcgcttcttt
agtgccaagcccgattttgaattcagcgaatgggatttctctggcagcaatgaggaagag
gccgcgacgctgtttggtatctttgaagagttgggcgcggaagtgtatatggcggtccac
gaagacctgggcgcacccgtctgtcgcattctggtgccgggttactcagaggtgtacccc
attgaagatttaatctgggataacaccaataaagcgttggactaccgcaaagatattctc
aatttgcaccgcttggatgacgctcagcttaccgatctggttgagcggctagaagagagc
cagatggatgaccacgccgatatcatcacgctgatcggtatcgagtttgatgagaacact
gtgtgggggcagctaacgattctagagctcaagctgctggtttaccttgcgctgcaacgc
catgaagaggcgctggactgcgtgcagatgttcctgcagtacaacgataataccgttgag
cgcggcctgttctaccaagcggtaaacgcggtgctggaaattgtgctggatggcgaactg
gagcttgaagactatctgcataacttccagcgcatgttcggcgaagcgaccatggcggct
gttgtggggtcggtgagcggcgaagtgcgcttccacggcctaacgccgactaacatgcag
ttagaaggcctggagcgccaccagcgcttgatcgaaagctataagaagcttcatgcggca
cgggcggcgaaagcgggcatttaa
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