Halomonas sp. MS1: NF683_02860
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Entry
NF683_02860 CDS
T09972
Name
(GenBank) YadA-like family protein
Organism
hams
Halomonas sp. MS1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
YadA_head
ESPR
Motif
Other DBs
NCBI-ProteinID:
UTD56178
LinkDB
All DBs
Position
complement(588659..597085)
Genome browser
AA seq
2808 aa
AA seq
DB search
MNNVFRLIWNRTLGRLVVASEASRAKSKAGSCQGLVAGLVVSGLVSLSPSASAAVGIAGG
TGTGTAISQCTGGTQANAGDFSAIAIGCEAVASSSGDVVAIGTKAIADGASSIAIGRNAR
TNAGTGDTHSIAIGDSAEAWGQSIALGVQATADQGTNNIDRSSIAIGAKSLVDDDSDTSV
AIGVQAKVIGGEEAVALGARAFSSADLGVAIGTDSSVGAAGAIALGFGATAGNADSVALG
SNAVTAAAVGTANTTIRGTTYTFAGTAPTGTVSVGDVSSERTLTNLAAGRISANSTDAIN
GSQLYATNQAIEDISVTAGTGWDLTANGEASGENIAPGETADFSEGKNIAITRTSNSIEV
ATADDVDFSNINVTNQLDVAGDTNIGGNTTINGDTTVKGDTYLGDNFKVVNNEAFYDGAI
TENTHIVNKEYVDGGIGDLANTPITFAGDTGTTDRKLGDELNVVTSNANLSTEVTDDETL
VIAMSDDLEVNSVTTNSLGVTNNATIGGTLNVTGQTTLNGGLDMAGNKITNVAPGTDGTD
AVNVDQLTDVSDVANKGWDLTANGEATGENIAPGETADFTQGKNIAITRTGNSIEVATAD
DVEFTNVEVTENLNVAGDTNIAGDTIIGGSTIINENLTVEGTTQLGDNFFVNNEGNVTYD
GDITENNHITNKQYVDNSVTELGDTPLTFAGDSGTPFERKLGEQTNVKGGSTGTLTDGNI
GVVADGTDTLQVKLAENIDLGTNGSVVMGDTTVNNNGLTIAGGPSITNTGIDAGNTTITN
VAPGVNGTDAVNVDQLTDVSDVANKGWDLTANGEATGENIAPGETADFSEGKNIAITRTS
NSIEVATADDVEFTNVEVTENLNVAGDTNIAGDTIIGGSTTINENLTVEGTTQLGDNFFV
NNEGNVTYEGDITEGDHITNKTYVDGLGDDLVAEGLNFAGNDGVVIHKDLGEQLNIVGGM
TDLTADAASAENLRTVQNAEGDLEVQLSKNLTNLESVDSTTVNVTEELTVANNTTINEGG
ITTNNVDITENLTVAGETQLGDNFFVTNEGNVTYDGDITEGNHITNKTYVDGLGDDLVAE
GLNFAGNDGVVIHKDLGEQLNIVGGMTDLTADAASAENLRTVQNAEGDLEVQLSKNLTNL
ESVDSTTVNVTEELTVANNTTINEGGITTNNVDITENLTVAGETQLGDNFFVTNEGNVTY
DGDITEGNHITNKTYVDGLGDDLVAEGLNFAGNDGVVIHKDLGEQLNIVGGMTDLTADAA
SAENLRTVQNADGDLEVQLSKNLTNLESVDSTTVNVTEELTVANNTTINEGGITTNNVDI
TENLTVAGETQLGDNFFVTNEGNVTYDGDITEGNHITNKTYVDGLGDDLVAEGLNFAGND
GVVIHKDLGEQLNIVGGMTDLTADAASAENLRTVQNADGDLEVQLSKNLTNLESVDSTTV
NVTEELTVANNTTINEGGITTNNVDITENLTVAGETQLGDNFFVTNEGDVTYTGDITEGE
HITNKTYVDGLGDDLVAEGLNFAGNDGAVIHKDLGEQLNIVGGMTDLKADAASAENLRTV
QNADGDLEVQLSKNLTNLESVDSTTVNVTEELTVANNTTINEGGITTNNVDITENLTVAG
ETQLGDNFFVTNEGDVTYTGDITEGEHITNKTYVDGLGDDLVAEGLNFAGNDGVVIHKDL
GEQLNIVGGMTDLTADAASAENLRTVQNADGDLEVQLSKNLTNLESVDSTTVNVTEELTV
ANNTIINEGGITTNNVDITENLTVAGETQLGDNFVVNNDGNVTYTGDITEGEHITNKTYV
DGLGDDLVAEGLNFAGNDGVVIHKDLGEQLNIVGGMTDLKADAASAENLRTVQNADGDLE
VQLSKNLTNLESVDSTTVNVTEELTVANNTTINEGGITTNNVDITENLTVAGETQLGDNF
VVTNEGNVTYDGDITEGNHITNKQYVDNSVTELGDTPLTFGANEGEDTERRLGDRLDIVG
EADDEGHSNIITKVTNEETLELALNADLNVDNSITVGETFIDGDSVTTNNMTVNESLTVE
GDTYLNENLYVDGSTTINENLTVEGTTQLGDNFFVNNEGNITYDGDVTENNHITNKQYVD
NTVSEVADTPLTFGADEGEDTERRLGDRIDIVGEADDEGHSNIITKVTDEETLELALNAD
LNVDNSITVGETFIDGDSVTTNNMTVNESLTVEGITQLGDNFLVNNEGNVTYDGDITENN
HITNKSYVDNSVTKLGDTPLTFGADEGDDTERRLGDRLDIVGEAGDEGHSNIITKLSDDE
TLELALNDDLQVGNSITVSESGPVISVEGIDMSDTKITNLAEGDVSADSKDAVNGSQLYQ
LESIVTNVTGDISNEYITENGLGIRYVRTNDTGLEVSDAFAQGEGSTAVGYEAVASADRA
LAMGYDAIASHQGSVALGEGARTAEAVGTASVDIAGQTYQFAGASPVATVSVGSVGSERT
ITNVAAGRITADSTDAINGSQLYAAMDFMGSLDDRLTIVEGDTGGGGADGAVMYDRDDNG
DINYDSVTLAGEDGTKLTNVADGDISNDSSDAINGSQLHDTNQNVANNTTNIVDNSQRIT
NNEGNIADNSQRITTNENSITDINETLGLGLNFGADEGDTVNRQLGDTVAITGDDNITTK
TTDDGVQITMNRDLDVDSVTTGNTTVNNDGVSIKDGPSMTVNGIDAGGTTITNVAPGVNE
SDAVNVGQMNELGRRFQNEIVNVHGRIDSVERNANAGSASAIAASTVPQAWMPGKSMIGV
GAGTYGGESAVSVGISRLSDNGRWVIQGKVTGDSQSNFGAGIGAGWHW
NT seq
8427 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgtgtttcgactaatttggaaccggacccttggtcggttagtagtcgcctca
gaagcttctcgagctaaaagcaaagccggaagttgccaaggattagtggctgggttagtc
gttagtgggcttgtttcgctgtctccatccgcatctgcggcggtgggcatagctggggga
actgggactggaacagcaatatcacagtgcactggtggcactcaagcgaatgctggtgac
tttagcgctatcgcaattggctgcgaagctgtggcttctagtagtggggacgttgttgct
ataggtaccaaagcgatcgctgatggtgccagctcgattgcaataggtagaaatgcccga
actaacgcagggacaggtgatacacacagcatagcgattggggattcagccgaggcttgg
gggcaaagtattgctttgggggtgcaggccaccgcggatcaagggaccaataatattgat
cgctctagtatagcgattggcgcaaaatcccttgtggatgatgatagtgatacgagtgta
gcaataggagttcaagcgaaagtaataggcggtgaagaagcggtggctctaggggctcga
gcgttctcctcggccgacttgggggtggctattggaacagattcgagtgtgggagcggca
ggtgctatagcgctgggcttcggcgccacggcgggcaacgctgatagcgtagctctgggc
agtaatgccgtaactgcagcggcggtgggtactgctaataccactatacgtggtacgacc
tacacattcgctggcaccgcaccgacgggcacggtgagcgtaggcgatgtgagtagtgag
cgtaccctcaccaacttggcagctggtcgcatctcggccaatagcaccgatgccatcaac
ggcagccagctgtacgccactaatcaggcgattgaagatatttccgtgactgccggcact
ggttgggatctgaccgccaatggtgaagcctcgggtgagaacattgcgcctggtgaaacc
gccgacttcagtgaaggcaagaacatcgcgattacccgtacaagtaacagcattgaagta
gccacggcagatgatgtcgacttctcgaatatcaatgtcaccaaccagctggatgtcgcg
ggtgatactaatatcggcggcaacacgacgattaacggcgacaccacagtgaagggcgac
acctatctgggtgataacttcaaggtcgtcaataacgaagccttttacgacggcgcgatc
actgaaaacactcacatcgttaacaaagagtatgtggacggtggcattggtgacctggct
aacaccccgattactttcgctggtgatactggcacaacggatcgtaagctaggtgacgaa
ctgaatgtcgtgaccagcaatgccaacctcagcaccgaagtgactgacgacgagacgctt
gttattgcgatgagcgatgacctggaagtcaacagcgtcaccaccaactcactaggcgta
accaacaacgccaccatcggcggcacactgaacgtgactggccagaccaccttgaacggc
ggcctggatatggcgggcaataagatcaccaacgttgcgccaggaacggatggcactgac
gcggtgaatgttgatcagctaaccgacgttagtgatgtggccaacaaaggctgggatctg
acggccaatggtgaagccactggcgaaaatatcgcccccggtgaaaccgctgacttcacg
caaggtaagaacattgcgattactcgaacgggtaacagtattgaagtggctactgcggat
gatgtcgagttcacgaacgtcgaggtaactgagaacctgaacgtcgcgggcgatacgaat
atcgcaggtgacactatcattggtggcagcactatcattaatgaaaacctgacggtggaa
ggcaccacccaactgggcgacaacttcttcgttaacaatgaaggtaatgtcacctatgac
ggtgatattacagaaaataatcacattaccaacaagcagtatgtggataactcagtgacc
gagctgggggatacgccgttgacgtttgcgggcgatagcggcacaccgttcgagcgcaag
ctgggtgagcagaccaacgttaaaggtggcagcaccggtaccttgactgatggcaacatt
ggcgtagtggccgacggtaccgatacgctccaagtcaagctagctgaaaatattgatctg
gggacgaacggcagtgttgtgatgggggataccaccgttaataacaacggcctgaccatc
gcgggtggtcccagcatcaccaatacgggcattgatgcgggcaacaccaccatcaccaat
gttgcgccaggtgttaacggcacggatgcggtgaatgttgatcagctaaccgacgttagt
gatgtggccaacaaaggctgggatctgacggccaatggtgaagccactggcgaaaatatc
gcccccggtgaaaccgctgattttagcgaaggcaagaacattgcgattacccgtacaagt
aacagcattgaagttgcaactgcggatgatgtcgagttcacgaatgtggaggtgactgag
aacctgaacgtcgcgggcgatacgaatatcgcaggtgacactatcattggtggcagcact
accattaatgaaaacctgacggtggaaggcaccacccaactgggcgacaacttcttcgtt
aacaatgaaggtaatgtcacctatgagggtgacatcaccgaaggcgaccacatcaccaac
aagacctatgtcgatggtttgggcgacgacctcgttgccgaaggcctcaacttcgcgggt
aacgacggtgttgtgatccacaaagacctgggtgagcagctcaacatcgttggcggcatg
accgatctgacggcagatgctgcctcggccgagaacctacgtacggttcagaacgcagaa
ggcgatcttgaagtccagctgtcgaaaaacctgaccaacctggaaagcgtcgactcgacc
acggtcaacgtcaccgaagaactgacggtggccaacaacaccactatcaatgaaggtggc
attaccaccaacaacgtcgatatcaccgaaaacctcacggtggcaggtgagacccaacta
ggcgacaacttcttcgtaactaacgaaggcaatgtcacctacgatggcgatatcaccgaa
ggcaaccacatcaccaacaagacctatgtcgatggtttgggcgacgacctcgttgccgaa
ggcctcaacttcgcgggtaacgacggtgttgtgatccacaaagacctgggtgagcagctc
aacatcgttggcggcatgaccgatctgacggcagatgctgcctcggccgagaacctacgt
acggttcagaacgcagaaggcgatcttgaagtccagctgtcgaaaaacctgaccaacctg
gaaagcgtcgactcgaccacggtcaacgtcaccgaagaactgacggtggccaacaacacc
actatcaatgaaggtggcattaccaccaacaacgtcgatatcaccgaaaacctcacggtg
gcaggtgagacccaactaggcgacaacttcttcgtaactaacgaaggcaatgtcacctac
gatggcgatatcaccgaaggcaaccacatcaccaacaagacctatgtcgatggtttgggc
gacgacctcgttgccgaaggcctcaacttcgcgggtaacgacggtgttgtgatccacaaa
gacctgggtgagcagctcaacatcgttggcggcatgaccgatctgacggcagatgctgcc
tcggccgagaacctacgtacggttcagaacgcagacggcgatcttgaagtccagctgtcg
aaaaacctgaccaacctggaaagcgtcgactcgaccacggtcaacgtcaccgaagaactg
acggtggccaacaacaccactatcaatgaaggtggcattaccaccaacaacgtcgatatc
accgaaaacctcacggtggcaggtgagacccaactaggcgacaacttcttcgtaaccaac
gaaggcaatgtcacctacgatggcgatatcaccgaaggcaaccacatcaccaacaagacc
tatgtcgatggtttgggcgacgacctcgttgccgaaggcctcaacttcgcgggtaacgac
ggtgttgtgatccacaaagacctgggtgagcagctcaacatcgttggcggcatgaccgat
ctgacggcagatgctgcctcggccgagaacctacgtacggttcagaacgcagacggcgat
cttgaagtccagctgtcgaaaaacctgaccaacctggaaagcgtcgactcgaccacggtc
aacgtcaccgaagaactgacggtggccaacaacaccaccatcaatgaaggtggcattacc
accaacaacgtcgatatcaccgaaaacctcactgtggcaggtgagacccaactaggcgac
aacttcttcgtaaccaacgaaggtgatgtcacctacaccggtgacatcaccgaaggcgaa
cacatcaccaacaagacctacgtcgatggtttgggcgacgacctcgttgccgaaggcctc
aacttcgcgggtaacgacggtgctgtgatccacaaagacctgggtgagcagctcaacatc
gttggcggcatgaccgatctgaaggcagatgctgcctcggccgagaacctgcgcacggtt
cagaacgccgacggcgatcttgaagtccagctgtcgaaaaacctgaccaacttggaaagc
gtcgactcgaccacggtcaacgtcaccgaagaactgacggtggccaacaacaccaccatc
aatgaaggtggcattaccaccaacaacgtcgatatcaccgaaaacctcactgtggcaggt
gagacccaactaggcgacaacttcttcgtaaccaacgaaggtgatgtcacctacaccggt
gacatcaccgaaggcgaacacatcaccaacaagacctacgtcgatggtttgggcgacgac
ctcgttgccgaaggcctcaacttcgcgggtaacgacggtgttgtgatccacaaagacctg
ggtgagcagctcaacatcgttggcggcatgaccgatctgacggcagatgctgcctcggcc
gagaatctgcgcacggttcagaacgccgacggcgatcttgaagtccagctgtcgaaaaac
ctgaccaacttggaaagcgtcgactcgaccacggtgaacgtcaccgaagaactgacggtg
gccaacaacaccatcatcaatgaaggtggcattaccaccaacaacgtcgatatcaccgaa
aacctcacggtggcaggtgagacccaactaggcgacaacttcgtcgtcaacaacgacggt
aacgtcacctacaccggtgacatcaccgaaggcgaacacatcaccaacaagacctacgtc
gatggtttgggcgacgacctcgttgccgaaggcctcaacttcgcgggtaacgacggtgtt
gtgatccacaaagacctgggtgagcagctcaacatcgttggcggcatgaccgatctgaag
gcagatgctgcctcggccgagaacctgcgcacggttcagaacgccgacggcgatcttgaa
gtccagctgtcgaaaaacctgaccaacctggaaagcgtcgactcgaccacggtgaacgtc
accgaagaactgacggtggccaacaacaccactatcaatgaaggtggcattaccaccaac
aacgtcgatatcaccgaaaacctcacggtggcaggtgagacccaactaggcgacaacttc
gtcgtaaccaacgaaggcaatgtcacctacgatggcgatatcaccgaaggcaaccacatc
accaacaagcagtacgtggataactcagtgaccgagttgggcgatacgccactgacgttt
ggtgccaacgaaggtgaagacactgagcgccgtttgggcgatcgtctcgacatcgtgggc
gaagccgatgatgaaggtcacagcaacatcatcaccaaggtgactaatgaagaaacactg
gagttggcgctgaatgccgacttgaacgtcgacaacagcatcaccgtgggcgagactttt
attgatggtgacagcgttaccaccaataacatgacggtgaacgagagcctgacggttgag
ggtgacacctatctgaacgagaacctatacgtcgacggcagcaccactatcaacgaaaac
ttgacggtagaaggcaccacccaactgggcgataacttcttcgttaacaacgaaggtaac
atcacctacgacggcgacgtcaccgagaacaaccacatcaccaacaagcagtatgtggat
aacacggtcagcgaagtggcggatacaccgttaacgtttggtgctgatgaaggtgaagac
actgaacgccgcttgggcgaccgtattgatattgtgggcgaagccgatgatgaaggtcac
agcaacatcattaccaaagtgactgatgaagaaacactggaattggctctgaatgctgac
ttgaacgtcgacaacagcatcaccgtgggcgagacctttattgatggtgacagtgttacc
accaataacatgacggtgaatgagagcctgacggtggaaggtatcactcaactgggcgat
aacttcttagttaacaacgagggtaacgtcacctacgacggagacatcactgaaaacaac
cacatcaccaacaagagctacgttgataacagcgtgactaagttgggggatacgccgctg
acgtttggtgctgatgaaggtgatgacactgaacgccgattgggcgaccgtctcgatatc
gtaggcgaagccggtgacgaggggcacagcaacatcatcaccaagctgagcgatgatgag
acgttggaattggcgctaaacgatgatctgcaagtaggtaatagcatcaccgtcagtgaa
agtggtcctgtcattagtgtcgagggtatcgatatgagtgatactaagatcactaacttg
gcagaaggcgatgtatctgcggatagtaaagatgcagttaatggttctcagctttatcag
ctagaaagcatcgtgacgaacgtgactggcgatattagtaatgaatatattactgaaaat
ggcttaggtattcgctacgtgcgcaccaacgacactggacttgaagtaagcgatgccttt
gcccaaggagaaggttccaccgccgtgggctacgaggctgtggcctctgcagatcgcgca
ctggcgatgggctacgacgctattgcctcgcatcaaggtagcgtagcgctaggggaaggc
gctcgcactgcagaagcggttggtaccgcatcggtagacattgcaggccaaacgtaccag
tttgcaggtgcttctcccgtcgccaccgtcagcgttggcagtgtgggcagcgagcgcacc
atcaccaacgtggcggcagggcgtatcaccgcggatagcaccgatgccattaatggtagc
cagctctatgccgcgatggactttatgggcagcctggatgatcgtctgacgattgttgaa
ggtgacacgggtggcggtggcgcagacggcgctgtcatgtatgaccgcgatgacaacggt
gatatcaactacgacagcgttacgctggcaggtgaagatggcaccaagctgacgaacgtt
gcggatggcgatatcagcaatgatagctccgatgcgattaacggcagccagttgcacgat
accaaccagaatgtggctaacaataccaccaatattgttgacaacagccagcgtattacc
aacaacgaagggaatatcgccgacaacagccagcgtattaccacgaatgaaaacagcatc
acggatatcaacgaaacgctggggctagggttgaactttggcgctgatgaaggtgatacg
gttaaccgccagctgggtgatacggtggcgatcaccggtgatgacaatatcacgaccaag
acaaccgatgacggtgtacagataacgatgaaccgtgatttggatgtagatagtgtcacc
accggcaacaccacggttaataacgacggtgtgagcattaaagatggcccgagcatgacg
gttaacggcattgatgcgggtggcaccactatcaccaacgtcgcaccgggtgttaatgag
agcgatgcggtcaatgtagggcagatgaacgagcttggccgtcgcttccagaacgagatc
gtcaacgtgcatggtcgtatcgacagcgtcgaacgcaacgcgaatgcgggctctgccagt
gcgattgccgcttccacggtgccgcaagcctggatgcccggtaagagcatgattggtgtc
ggggcaggtacttatggcggtgagtcggcggtatcggtcggtatctcgcgcctttctgac
aatggtcgctgggtgattcaaggcaaggtgacgggtgactcgcaaagcaacttcggcgca
ggtattggcgctggctggcactggtaa
DBGET
integrated database retrieval system
