KEGG   Halomonas sp. MS1: NF683_02945
Entry
NF683_02945       CDS       T09972                                 
Name
(GenBank) HlyD family efflux transporter periplasmic adaptor subunit
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
hams  Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:hams00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hams02000]
    NF683_02945
   02044 Secretion system [BR:hams02044]
    NF683_02945
Transporters [BR:hams02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   NF683_02945
Secretion system [BR:hams02044]
 Type I secretion system
  Adhesin protein transporter
   NF683_02945
SSDB
Motif
Pfam: Beta-barrel_AprE HH_AprE BSH_RND BSH_CusB BSH_CzcB BSH_YknX BSH_Fcp1 Biotin_lipoyl BSH_YhbJ Beta-barrel_YknX FtsH_ext DUF8139 BSH_LcnD Peptidase_M23
Other DBs
NCBI-ProteinID: UTD56193
LinkDB
Position
complement(629153..630385)
AA seq 410 aa
MSQSHNRKTDSKNLLFLDFEQDKQRQNQHADDAKTIRSVRIIWWILACFLSFAVWAYFAE
LVEVSSGEGKVIPSSREQIVQSLEGGIVTQLNVREGDIVEAGQVLAQLDPTQSQSSVDET
AARYRAALARASRLEAEVNEEPLSFPDELGAYPALLASERLLYATRTRALESSLAGIRDT
LAIVREELGLTRSLVQVGAASNVEVLRLRRQESELELQAADVRSEYFVLAREELAEAHAD
VEAFSSVIMGRSDTLSRLTMLSPVRGVVKDVEVTTTGGVIPPNGRLMTIVPLDDQLLIEA
RISPRDIAFIHPGQTANIKITAYDHSTYGGMEGEVVTISPDTVQDEADPNIFYYRVFVRT
EKDSLENDIGTKFAIVPGMVATVDIRTGSKTVFDYLVKPLNRAQDAMRER
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgagtcagtcacacaatcgtaaaacagattcaaaaaacttgctttttcttgattttgaa
caagataaacagcgccaaaatcaacatgccgatgatgctaaaacgatccgttcggtacgt
attatttggtggatattggcttgcttcttgagctttgctgtctgggcctacttcgcagag
ctggtcgaagtgtcttccggcgagggcaaggtgattccctcttcacgcgaacaaattgtg
cagtcgcttgagggggggatagtgacccagctaaacgtgcgagaaggggatattgttgaa
gctgggcaagtgcttgctcagttagacccaacccagtctcaatctagcgtcgatgaaaca
gcggccagataccgggcggccttagcacgggcaagcagactggaggcagaggtaaatgaa
gagccgctgagttttcctgacgaactcggtgcttacccagctttattagccagtgaacgg
ttgttgtatgcaaccagaacaagagcattagagagttcgcttgcaggtattcgagatacg
ttagcgatagtgcgtgaggagttagggttaacaaggtcgctagttcaggtaggagcagca
agtaatgtggaagtgctcaggctacgtcgccaggaatcagagctggaactccaagccgct
gatgtccggtcagagtactttgtgttggctagggaagagcttgctgaggctcatgctgac
gttgaagctttttcttctgtgattatggggcgctcggatacgctttctcggcttaccatg
ctttctccagtaaggggggtggtaaaagatgtggaggtgacaaccacgggcggggtgatt
ccacccaacggccggttaatgaccattgtgcctttggatgatcagttgctgatcgaagca
cgtatctcgccacgagatatcgcgtttattcatcctgggcagacggctaacattaaaata
acggcttatgaccatagcacttatggtggcatggaaggtgaagttgtgacgatttcaccg
gatacggtacaggatgaagccgacccgaatattttttactaccgtgtatttgtacgtacg
gaaaaggattcgttagaaaatgatataggcacgaagtttgccattgtgcccggtatggtg
gcgacggtggatatacgcacgggcagtaaaaccgtctttgattacttggtaaaaccactg
aatcgcgcacaagatgcaatgcgagaaaggtaa

DBGET integrated database retrieval system