Halomonas sp. MS1: NF683_02985
Help
Entry
NF683_02985 CDS
T09972
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_02985
DNA repair and recombination proteins [BR:
hams03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NF683_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
AAA_16
DUF7577
SLFN-g3_helicase
zf-tcix
DZR
Flavi_DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UTD57632
LinkDB
All DBs
Position
complement(638312..640141)
Genome browser
AA seq
609 aa
AA seq
DB search
MPQFSPSSDPISGSPPRLRPYQTEAVKRVVGHFRASSAPAVVVLPTGSGKSLVIAELARL
ARGRVLVLAHVRELVEQNHAKYQAYGLQADIFSAGLKRKEASRQVVFGSVQSVVRNLERF
SDASFTLLVIDECHRVSLEKDASYRQVIEHLQRQNPQLKILGLTATPFRLGQGFIYHRHH
HGMVRGDEACFFADCVFEQPLRLMVKQGFLAAPKRLDMAIEGYDFSALAPAPSGLFREEE
LNRVVAGSRATPRIIQQVVEYAEERQGVMIFAATVAHAEEIISYLPADQAALITGATASQ
ERASLIEAFKARELKFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPG
KTNCLVLDFAGNPWDLYAPEVGEPKPDSDSEPVQVECPACGHANLFWGKRDGELVIEHFG
RRCQGLVDNPNPPAKPGKGRQGTDQQQCDFRFRFKVCEQCGAENDIAARRCHGCEQLLVD
ADDKLKDALKLKDAKVLRVSGMQLEATTNGRGLPRLKVTYHDEDGASLAEWFALETPAQR
RAFYAVFLRNHLSAPGAKWQPASPTEVVEEQRRLRHPDFVVGRKVGRHWQLRDKLFDYQG
RYRKAAEAG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattcagcccttccagcgatcccatttctggctcaccaccccgtttacgcccc
taccaaacggaggcggtaaagcgcgtggtgggccacttccgtgccagcagcgcgcctgca
gtagtggtattacccactggaagcggtaagtcgttggtgattgctgagctggccaggcta
gcccgtggccgtgtgctggtgctggcccacgtgcgtgagctggttgagcaaaatcatgcc
aagtaccaagcctacgggcttcaggcagatattttcagcgcaggtcttaagcgtaaagaa
gccagccgacaagtggtatttggttcggtgcagtcggtggtgcgtaatctggagcgcttc
agtgacgccagttttacgttactggtgattgatgaatgccaccgagtatcgctggaaaaa
gatgccagctatcgtcaagtgattgagcatctgcagcgtcagaacccacagctaaaaatt
ctcggcttaaccgccacgccgtttcggttagggcaggggtttatctaccaccgccatcac
cacggcatggtgcgcggtgatgaagcgtgtttctttgccgactgcgtctttgaacagccg
ctgcgattgatggtgaagcaaggttttttggcagcgcctaaacggctggatatggccatt
gaaggctacgatttttctgccttggcccctgcgcccagtgggttgtttcgtgaggaagag
ctcaatcgcgttgttgccggtagccgtgctacgccaaggattattcagcaggtggttgag
tacgctgaagaacgtcaaggggtgatgatttttgccgcaacggtcgctcatgctgaagaa
attatcagctacttacctgcggaccaggcggcgttgattaccggcgcgacggcctcccaa
gagcgcgcctctctgattgaggcgttcaaggcgcgtgagcttaagtttctagttaatgtg
gccgtgctaaccacagggttcgatgcgccccatgtggatttaatcgctattctgcggccc
acggaatcggtgagcctttatcagcagattgttggccgagggctgcgtttatcaccgggc
aaaaccaactgcctagtgttggatttcgccggtaatccctgggacctttatgcgccagaa
gtcggcgagccaaaaccagacagcgacagcgaaccggtccaggttgagtgcccggcgtgt
ggccatgccaatctattctggggtaagcgtgatggagaactggtgattgagcattttggc
cgccgctgccagggtctggtagacaatcccaatccgcccgctaagccgggcaagggcagg
cagggcaccgatcaacaacagtgtgattttcgctttcgctttaaagtttgtgagcagtgt
ggcgctgagaatgatattgccgcccgccgatgtcatggttgcgagcaactgctggtggat
gccgacgataagctcaaagacgcactcaaattaaaagatgccaaagtgctgcgagtcagc
ggtatgcagttagaggccacgaccaatgggcgggggctaccacgcctaaaagtgacctat
cacgatgaagatggcgcgagcttggcagagtggtttgcgctggaaacgcctgctcagcgg
cgggcattttatgctgtttttttacgtaaccacctgagtgccccaggcgctaagtggcag
cctgcttcgccgaccgaggtggtcgaagagcagcgccgcctgcgccatcctgattttgtt
gtggggcgtaaagttgggcggcactggcagcttcgcgataagctgtttgactaccaaggg
cgttatcgcaaggcggctgaggcaggctag
DBGET
integrated database retrieval system
