Halomonas sp. MS1: NF683_03025
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Entry
NF683_03025 CDS
T09972
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hams
Halomonas sp. MS1
Pathway
hams03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NF683_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_03025
Enzymes [BR:
hams01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF683_03025
DNA repair and recombination proteins [BR:
hams03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF683_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
nSTAND3
AAA_30
Zn_ribbon_6
AAA_19
nSTAND_NTPase5
AAA_7
HypA
Zn_ribbon_TOP3B
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UTD56208
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All DBs
Position
650228..652612
Genome browser
AA seq
794 aa
AA seq
DB search
MPPPDPLPSTAYGFEKTANRLTAPSYRFRAAAYSSKLNAGGQLSDSVSNQARPQGGSTAP
FQVLKVALPSPLRRLFDYLPTRQPPACGWQIGLRVRVPFGRREVVGVVAELANGSELPHG
KLRAISEVLDDAPLPNDWQWLCHFAARYYQHSLGDTMQLAMPARLRQGHPMGGRTQTLWL
PLSPGDDLPLQRAPKQAELYALLRQHPHGLAGRAITAHGFTREQLLALQKKGFARAQETT
LTATPSTGGNLLASPSLPLNREQASALAVLHEKLENYHPCLLEGVTGSGKTEIYLQLIEA
LAAKGKQSLVLVPEIGLTPQTLARFKSRFRVPVVALHSGLTDLERLDVWEAAANGRALVI
IGTRSAIFTPLKNPGAIIVDEEHDGSYKQHDGLRYHARDLAVARAHYHNIPLLLGSATPS
FESLQQALSGHYRHLRLTQRPSRHPPAKLELIDLRHQRRQGGLLPGAITAIKNTLASGKQ
ALVFINRRGFAPTLACHSCGWIAECGQCDSRMTLHRQPALLACHHCDSRRALPDACPECG
SADLRALGSGTERTEETLQGLFPNVTVHRIDRDSTRKKESFEQILKEIQRGEPCLLVGTQ
MLAKGHHLPHVTLVVVVNADGGLYAADFRALEHSAQLLEQVAGRAGRAAHPGRVLVQTLH
PDDPHLGQLAEHGYGALARSLLEERRLAMLPPFCFMALLRIESPHEEAATALGQQAAQAL
HQWLTMVKLPVRCLGPVPAPMERRQNRYHVHIMLAADKRSQRHTAANWLVQWLEANREAR
KVRWSIDIDPQTLA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacctgatccgttgccaagcaccgcatacgggtttgaaaaaactgctaaccgg
ttaaccgctccatcctatagattcagagcggccgcgtattctagcaaactaaacgccgga
ggccaattgtccgactctgtttctaaccaggcacgccctcaaggcgggtccacagcacct
tttcaagtgctaaaagtcgctctaccatcaccgctgcggcgtttatttgactatttacca
acacgccaaccacccgcttgtggctggcaaataggccttagagtgcgcgtcccctttggc
cgcagagaagtggtcggcgtggtggcagaacttgccaatggcagcgaactgcctcacggg
aagctacgcgctattagcgaggtgctcgatgacgcccccctgcccaacgactggcagtgg
ctatgccatttcgcggcccgttattatcagcacagtttaggcgacacaatgcagctggcc
atgcccgctcggctgcgccagggccacccgatggggggacgaacacagaccctgtggctg
ccgctatcacctggggacgacctgccgcttcagcgagcaccgaaacaagccgagctgtat
gccctgctgcgtcagcatccacatggactggctggtcgagcaatcactgctcatggtttc
acccgtgaacagctgctagccttgcaaaaaaagggcttcgcccgtgcccaggaaaccacg
ctaaccgcaacaccgtccactggtggcaacctgctggcctcaccatcactgccgctgaac
agagagcaggcctcggcacttgccgtattgcatgaaaagctcgaaaactaccatccctgc
ttacttgaaggcgtgaccggaagcggtaaaaccgaaatctaccttcagctaattgaagcc
ctcgccgctaagggcaagcagtctctggtactggtgcctgaaataggtctcacgcctcaa
accctggcgcgctttaagagccgctttagggtaccagtagtggcgctacactcagggctt
accgacctggagcgcctggatgtatgggaagccgctgccaatggccgcgcgctagtcatt
atcggcacccgttcggctatttttacgccactcaaaaacccaggcgccattatcgtcgac
gaagagcatgatggctcctataaacagcacgacgggcttcgctaccacgcccgggattta
gccgttgccagggctcattaccacaacatccccctgctgttaggcagcgccacgccttct
tttgagagtttgcagcaagcgctttctggccactatcgccatctgcgcctcacccaacgt
cccagccgacacccaccagccaagcttgaattgattgacctacgtcatcagcgacgccag
ggggggcttctgcccggcgccatcaccgctatcaaaaacaccttagcgtcaggcaagcag
gcgctggtttttattaaccgacggggattcgcaccaacgctggcttgccatagctgtggg
tggatcgctgagtgcggacagtgcgactcacgcatgacgctgcaccgccagcctgccctt
ttggcctgccaccattgcgatagtcggcgcgcgctaccagacgcttgccccgagtgtggc
agcgctgacctacgcgccctgggcagcggcaccgaacgaactgaagagacgctgcagggc
ttgttcccaaacgtcaccgttcaccgtattgaccgcgacagtacgcgtaaaaaagagagt
tttgagcagatactcaaagagatccagcgaggcgagccatgcttgctcgtcggcacccag
atgctggcgaaaggccatcacctaccccatgtcacgctggtcgtcgtcgttaatgccgac
ggtggactttacgctgctgattttcgcgcgttggaacacagcgcgcagttgctggagcag
gtcgccggtcgcgctgggcgtgccgctcatccagggcgagtactggtacaaacgctgcac
ccagatgacccgcacttgggccaacttgcggagcacggttatggcgcactcgcccgcagc
cttttggaagagcgccgcctcgctatgctgccgcctttttgctttatggcattgctacgc
attgaaagcccccatgaagaagctgccactgctttgggccagcaggctgcacaagcactt
caccaatggttaacaatggtaaaactaccggtgcgctgcctaggccccgttccagcaccc
atggagcgccgccaaaaccgttatcatgtgcacatcatgctggcagcagacaaacgtagc
cagcgccataccgctgctaactggctggtacagtggttagaagccaatcgtgaggcgcgc
aaagtccgatggtcaatcgacattgacccgcaaactctcgcgtag
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