Halomonas sp. MS1: NF683_06015
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Entry
NF683_06015 CDS
T09972
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hams02000
]
NF683_06015 (ybiO)
Transporters [BR:
hams02000
]
Other transporters
Pores ion channels [TC:
1
]
NF683_06015 (ybiO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
UTD56779
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Position
complement(1356432..1358813)
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AA seq
793 aa
AA seq
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MTPLRLFPWLGVWLLMLFAFLTTPALAQTTLSAGSEDTANAEEQPSYSALADLLEDEQAR
QELIELLRNQASVLPNELTSELSPEAAAQGSDLAPEDVSLPRQLAELTSRVVGDVGGQIE
QAVAVVGDLFTGQGASSFDMAAFVSAAINLGIVIVATFAIFLLCRRLAKPLFTKISGWSQ
QGSGLTPVLRLVLCVAIAAVVDVLLVAFAYVGGNLVAAFAVGETGELSTRASLFLNAFLV
IELLKAGMRMLFSSRYEGLRLLPISAKEASYWNRWLARLIGMVGYGLMVVVPLVNFYIAA
TLGQAVGTFIMLLAFIYAVGVVLKNRVRLRDNLNQMAARATMTASRVSLRLFARTWHLFA
LLYFLMVFVLTLLRPGDALPFVLFATLKTLAAVVIGLLSSAFLTQTIGRRIRLSDDLRRK
LPMLEVRLNSYVPNALRVLRTVLLVAVVMVVLDAWGVFNLAAWYASERGANLVGKLTSVA
IILIVAFGVWLGLASLIEHKLNPETGHGEPSARAKTLLSLFRNALVIAMVTITGMIVLSE
IGINIGPLIAGAGVLGLAIGFGAQKLVQDVITGIFIQVENAMNTGDVVTVGGVTGTAERL
SIRSVGIRDLSGTYHIVPFSSVDTVSNYMREYGNHVGEYGIGYNESIDEAIEQLQLAFED
LKESEEHSHKLLADLTVAGVTALADSSVNIRVVIKTTPGDQWGVGRAYNRLVKLRFDAAG
IEIPFPHTTLYFGETKGGKTPPANVRVLDSTAERKKVETSPIHQESEQLSNQSVQDTNES
DHLKPDHGDVDGV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccattacgtttattcccctggctaggcgtctggttattgatgctattcgccttt
ctgacaacgcctgcactcgctcaaacgacgttgagtgcgggaagcgaagacaccgctaac
gcagaggagcagccctcttattcggcacttgccgatctgctggaagatgagcaagcgcgc
caagaactgattgagctgctgcgaaatcaagcgtcagtgttacccaatgaactgactagt
gagttatcaccggaagcagccgcccaggggagtgaccttgcccctgaggatgtatcactg
ccccgtcagcttgcagagctaaccagtcgtgtggttggtgatgttggcggacagatagag
caggcagtggccgtggtgggcgacctatttaccggccaaggcgctagctcgttcgacatg
gccgcgtttgttagtgcggcaattaatttgggtatcgtgattgttgcgacgttcgcgata
tttttgctttgccgccgtttggctaaaccgttatttactaaaatcagcggctggtctcag
cagggcagtggtttaacgcccgtgctgcgtttggtgttatgtgtcgctattgctgccgtc
gtagatgtgttgttggttgcttttgcttacgttggcggtaacttggtggcggcgtttgcg
gtgggggaaacaggcgaactttctacccgcgcttcactatttctaaacgccttcttggtg
attgaactgctgaaagccggtatgcgaatgctgttctcttcacgctatgaagggctgcgc
ttgttacctatttcagcaaaagaagcttcctactggaatcgctggttagcgcgtttaatt
ggcatggtcggctatggcttgatggtggtcgtgccgctggttaatttctatattgcggca
accctaggccaagccgtcggcacctttattatgttgctggccttcatctacgcggtcggc
gtcgtgcttaaaaaccgtgtgcgcctgcgtgacaatcttaaccagatggcagcgcgagcg
acgatgaccgccagtcgcgtgtcgctgcgtttgtttgctcgaacctggcacttgtttgcg
ttgctctacttcctgatggtgtttgtgcttaccttgttacgccctggggatgcattgccg
tttgtgctgtttgccaccttgaaaacattggccgccgtggtcatcgggctgttgagctcg
gcgttccttacgcaaacgattggccggcgtattcggctatccgatgatctgcgtcgcaaa
ctgccgatgctggaagtgcgcttaaatagctatgtgcccaatgccctgcgtgtgctgcgt
accgtgctattagtagcggtcgttatggtcgtcttggatgcctggggagtgtttaaccta
gcggcatggtacgcctccgaacgtggcgcgaacctcgtcgggaaacttaccagcgtcgcc
ataatcttgatcgttgcgttcggtgtgtggctggggctagcaagcctgatcgagcataag
ctcaacccagaaaccggccatggcgaaccctctgcgcgtgctaaaacgctgttgagcctg
ttccgtaatgccttagtgattgccatggtgacaattaccggcatgatcgtgttgtcggaa
ataggcattaatatcgggccgctcattgctggtgccggtgtgctgggtttagcgattggt
tttggtgctcaaaaactggttcaggatgttattaccggcatctttattcaggtagagaat
gccatgaacaccggtgatgtggtaacggtaggcggtgtcactggtactgctgagcgatta
agtattcgttcggtaggcatacgtgatttgtctggcacttatcatatcgtgccgttctcc
agcgttgatactgtgtcgaactatatgcgtgagtacggtaaccacgttggtgaatacggt
atcggctataacgagagcatcgatgaagcaattgagcagctgcagttggcgttcgaagac
ctgaaggagagcgaagagcacagccataaactgctggctgacctgacagtggcaggtgtt
accgcgttggccgacagctctgtcaatattcgtgtggtgatcaaaacgacgccgggcgat
cagtggggtgttgggcgtgcctataaccgtttagtgaagttgcgctttgatgcagcaggt
atcgagattccattcccgcataccacgctctattttggtgaaacgaaaggtggcaaaaca
ccgcccgccaatgtgcgcgtgttggactccaccgctgaacgtaaaaaggtagaaacatcg
ccaatccatcaggaaagcgaacagctatccaatcagtcagttcaagacaccaatgagtct
gatcatctaaaacctgatcatggtgatgtagacggtgtgtaa
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