Halomonas sp. MS1: NF683_07835
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Entry
NF683_07835 CDS
T09972
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
hams
Halomonas sp. MS1
Pathway
hams03030
DNA replication
hams03430
Mismatch repair
hams03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NF683_07835 (ssb)
03430 Mismatch repair
NF683_07835 (ssb)
03440 Homologous recombination
NF683_07835 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hams03032
]
NF683_07835 (ssb)
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_07835 (ssb)
03029 Mitochondrial biogenesis [BR:
hams03029
]
NF683_07835 (ssb)
DNA replication proteins [BR:
hams03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NF683_07835 (ssb)
DNA repair and recombination proteins [BR:
hams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NF683_07835 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
NF683_07835 (ssb)
Mitochondrial biogenesis [BR:
hams03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
NF683_07835 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
tRNA_anti-codon
SSB_1
DUF3127
YorF
Pro-rich
Motif
Other DBs
NCBI-ProteinID:
UTD57118
LinkDB
All DBs
Position
1749387..1750046
Genome browser
AA seq
219 aa
AA seq
DB search
MARGINKVILIGNLGQDPEVRFTPSGTAVANLNLATSDTWMDRQSGQRQERTEWHRIVLF
NKTAEIAQQYLKKGSKVYIEGRLQTRKWQDQNGQDRYSTEIVANDMQMLDSRGGDFQGGG
APQGGYAQNNPAQGAPAQQQPAPQHPAPQHAAPQGHQGGGMPQQGGYPPQGGAPQGNYGG
APQPARGPQHNQPAPANQNSNYGAPDPGNFDDFDDEIPF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggtattaacaaagtcatcttgattggtaatctgggccaagaccctgaagta
cgctttacgccctcaggaacggcggtagcaaacctgaatttggcgacgtctgacacctgg
atggaccgccaaagcggacagcgccaagagcgtaccgagtggcaccgtattgtgttgttc
aataaaaccgctgagattgcccagcagtacctgaaaaagggctctaaggtatacattgaa
ggtcgcctacaaacccgtaagtggcaagaccaaaacggtcaagatcgctacagcacggaa
attgtggccaacgatatgcagatgctagatagccgtggcggcgatttccagggtggcgga
gcccctcaagggggttacgcacagaataaccctgcgcaaggtgcgccggcccagcagcaa
cccgcgccgcagcacccagctcctcagcatgcggcccctcagggtcatcagggtggcggt
atgcctcagcagggtggttaccctccccagggcggtgctcctcaaggtaactatggcggc
gcgccccagcctgctcgtggaccacagcacaaccagccagccccggctaatcaaaacagc
aattatggggcccccgacccaggcaacttcgatgattttgacgacgaaattccgttctga
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