Halomonas sp. MS1: NF683_07895
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Entry
NF683_07895 CDS
T09972
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_07895 (phrB)
Enzymes [BR:
hams01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NF683_07895 (phrB)
DNA repair and recombination proteins [BR:
hams03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NF683_07895 (phrB)
Prokaryotic type
NF683_07895 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UTD57130
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All DBs
Position
complement(1760983..1762395)
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AA seq
470 aa
AA seq
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MNLQLVWLRSDLRIHDNSALAAAAANGPVVAVFLRSVAQWQTHGHGATKLDFWARSVAAL
KASLNGLNIPLLHRDIDHYDEAAQVLLDIAHEHQITQLHFNYEYALNEQHRDQSVLDAFK
QAGITAQGHHDAVAFAPGSLLTGKGDYYGVFTPFSKAWHKQVTAQQLALRDTPGVQSPLE
INSDPLPALPSLDNDPVDKRLWPAGEEAASDNLERFLRFRGRHYKQQRDFPNVRGTSELS
PYLALGMISYRQCLQAVMSENGGHLADGDAGLTSWVNELIWREFYQHVAVGFPQVCRHQP
FQEHTKQLRWRDDDKGFQAWCEGRTGYPIVDAAMRQLVTTGWMHNRLRMITAMFLSKHLL
IDWRRGEAFFMRHLIDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDPEGEFIT
HWLPELKPLPKKARHAPPQDMLNPTDYPAPIVDHKAARQRALDAFKALSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcagctcgtttggctgcgtagcgacttacgcattcacgataactccgcgctt
gccgctgcggctgccaacggccccgtggtggccgttttcttacgcagcgtggctcaatgg
caaacacatggccacggggcgactaagctcgacttctgggcacgcagtgttgcggcgctc
aaagcgtcgcttaacgggcttaatattccacttttgcatcgtgatattgatcactatgac
gaagcggctcaggtgttgcttgatatcgcccacgagcaccagattactcaactccacttt
aactatgagtatgcgctgaacgagcaacatcgcgatcaatcggtgcttgatgcttttaaa
caagcagggatcaccgctcagggtcaccatgacgccgtcgccttcgcccctggcagttta
ttgaccggaaaaggcgattattacggcgtatttacaccgttttcgaaagcttggcacaag
caggtgactgcacagcagcttgccttacgtgataccccaggcgtgcaatctccgctagag
atcaatagcgacccactgcccgcgcttccatcgctggataatgaccccgttgataaacgc
ctctggcctgctggagaagaggcggctagtgacaatctcgaacgttttttacgctttcgt
ggacggcactataagcagcagcgagactttccaaacgttcgcggcaccagcgaactttcg
ccctatctagcgctgggtatgatctcctatcgccaatgccttcaagccgtgatgagcgaa
aatggtggccacttggccgatggagatgcggggctaaccagctgggtaaatgagcttatt
tggcgtgaattttatcagcacgttgcggtaggctttccccaggtttgccgtcaccaacct
tttcaagagcacaccaagcagctccgctggcgtgacgacgataaaggctttcaagcgtgg
tgtgagggccgtaccggctatccgattgtcgatgcggccatgcgccagctagtgactacg
ggctggatgcacaaccgcctgcgcatgatcaccgcgatgtttctaagtaagcacttgctg
attgactggcggcgcggtgaggcatttttcatgcgccatttaatcgacggtgagttttgc
gccaataacggcggttggcagtgggcggcatcaacggggacggatgcagcgccctatttt
cgtatttttaaccccactacccagtcaacgcgctttgatccagagggtgaatttattacc
cattggctgcccgagttaaaaccactgcctaaaaaagctcgccatgcgccgccccaggac
atgctgaacccaacggattacccagcccccatcgttgaccataaagcagcgcgccagcgt
gccctggatgcctttaaagcgctctcgaaataa
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