Halomonas sp. MS1: NF683_08905
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Entry
NF683_08905 CDS
T09972
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hams03021
]
NF683_08905 (nusA)
03009 Ribosome biogenesis [BR:
hams03009
]
NF683_08905 (nusA)
Transcription machinery [BR:
hams03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NF683_08905 (nusA)
Ribosome biogenesis [BR:
hams03009
]
Prokaryotic type
rRNA transcription factors
NF683_08905 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF4332
KH_NusA_C
S1_RRP5
RNA_pol_Rbc25
KH_KhpA-B
Glyoxalase_4
MRP-S35
DUF5110
Motif
Other DBs
NCBI-ProteinID:
UTD57314
LinkDB
All DBs
Position
1964681..1966195
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AA seq
504 aa
AA seq
DB search
MSKEILMVVDAISNEKGVPRDVIFEAVEAALASASRKRFDQEEANVRVHIDRRTGDYDTF
RYWTVVEDDEFETPDYEIKETIAEQRDPPLKLGDVVEKKIENAVFGRIAAQTAKQVIVQK
VREAERAEVVRQYADREGELVAGIVKKTTRDGLIIDLGENAEAFLPRNEMIHGERYRMNE
RVRALLVKVDPEARGAQLQLSRTCPEFIIELFKIEVPEIAEQLIEIKGAARDPGSRAKIA
VKTNDRRIDPVGACVGMRGSRVQAVSSELQNERVDIVLWDDNPAQLVINAMAPADVASIL
VDEDAHAMDVAVAQDNLAQAIGRSGQNVRLASELTGWRINVMTEDEAESKREQEIDSLVD
SFVQHLEVDEDVARLLVEEGFTTLEEVAYVPLEEMLEIEEFDEDLVEELRARAKDELLTM
AIASEEALDGAQPADDLLDMDGMERHLAFILASRGIVTMEDLAEQSVDDLVDIEELDEAR
AAALIMTARAPWFEDDGVSDSNTQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattttaatggtcgtggacgcgatctctaacgaaaaaggcgtcccccgc
gatgttatttttgaggcggttgaggccgcgctagctagcgcgtcacgcaagcgttttgat
caggaagaagccaatgtacgcgttcatatcgatcgccgcacgggcgactacgatacgttc
cgctactggaccgttgtcgaagatgacgaatttgaaacacctgattatgaaattaaagaa
accatcgccgagcagcgtgatccgccgctgaaactaggcgatgtggttgagaaaaagatt
gaaaatgccgtgtttggccgtatcgctgcacaaactgcaaagcaggttatcgtgcaaaag
gtacgtgaagccgaacgcgctgaagtggttcgtcagtacgctgaccgcgaaggcgagttg
gtagcaggtatcgtcaagaaaaccacgcgtgacggattgattatcgacctgggtgaaaac
gctgaggcgttcttgccgcgtaacgaaatgattcacggtgagcgctaccgcatgaatgag
cgggtacgcgccttgctagtgaaagttgatccagaagcgcgtggtgcgcagctacagctg
tcacgtacctgtcctgaattcatcattgagctgtttaaaattgaagtaccggaaattgct
gaacagctgattgaaatcaagggtgcagcgcgcgaccctggctcgcgggccaaaatcgcc
gttaaaactaacgaccgccgcatcgatcctgttggggcgtgtgttggtatgcgtggttct
cgcgtacaggcagtgtcgtcagagctgcaaaatgagcgtgtcgatattgtgctgtgggac
gacaacccagcgcagttggtgataaatgccatggcacctgccgatgtggcgtctatcctg
gttgacgaagatgctcacgccatggacgttgccgttgctcaagacaatctggcgcaggcc
attggtcgtagcggccagaacgtgcgcttagcttctgagctaaccggctggcgtattaac
gtgatgaccgaagatgaagctgagtcaaaacgtgagcaggaaattgatagcctggtggac
tcctttgttcagcatctggaagtggacgaagacgttgcccgcctattagtagaagaaggg
tttaccaccctggaagaagttgcctacgtgccgcttgaagagatgctcgaaatcgaagag
ttcgatgaagatttggtggaagagctgcgcgcacgagcgaaagacgagctgctgacgatg
gccattgcctcggaggaagcgctagacggtgcccaaccagcagacgatctgctggacatg
gacggcatggagcgccacctggccttcattctggctagccgaggcatcgtcaccatggaa
gatctcgccgagcagtctgtcgacgatctggtcgatatcgaggagttggacgaagcgcgc
gcagcggcactgatcatgactgcccgtgcgccctggtttgaagacgatggcgtatcggat
tcgaacacacagtaa
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