Halomonas sp. MS1: NF683_08920
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Entry
NF683_08920 CDS
T09972
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hams03016
]
NF683_08920 (truB)
Enzymes [BR:
hams01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NF683_08920 (truB)
Transfer RNA biogenesis [BR:
hams03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NF683_08920 (truB)
Prokaryotic type
NF683_08920 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UTD57317
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All DBs
Position
1969199..1970119
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AA seq
306 aa
AA seq
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MARRRRGLPVNGVLLLDKPKGISSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGTVIEQREIPRLTAEDVESVLARFHGEID
QVPPMYSALKHQGKKLYELAREGKHVERAARRVSVYDARLLAFEGTAFEMEVSCSKGTYI
RTLAEDIGHALGCGAHISQLRRLKTGPFTGDAMWTLEGLEALADQATREAELMPADVLVD
HLPSLTVDETAYGRLAHGQSASLAIGALEPDALARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgccgtcgcggattgccggttaatggcgtattgctgctggataagcctaag
ggcatttccagcaatcatgcgctgcagcgtgtgcgtcgtctgtttgaggcgcagaaagcc
ggtcataccggcacgctggaccctatggcaacaggcttgttacctatttgccttggggaa
gctactaagttttccgcgcacctgttagaagccgacaagatgtatcgcacccgtgtagaa
ctgggcgtgattacagacaccggtgatgccgaaggcacggtcattgagcagcgcgagatc
ccccgcttaacggctgaggatgtcgagtcagtcctggctcgctttcacggcgagattgac
caagtgccgccgatgtattcggcactgaagcatcaaggcaaaaagctttatgagcttgcc
cgtgagggtaagcacgttgagcgtgcagcgcggcgagtaagcgtgtatgatgcgcggctg
cttgctttcgagggcactgcctttgagatggaagtcagctgcagcaaaggcacgtatatt
cgtaccttggctgaagatattggtcatgcgctgggctgtggtgcccacattagccagttg
agaaggctcaaaacggggccctttactggcgatgcaatgtggacactggagggccttgag
gcgctggcagaccaagccacccgcgaggctgaactaatgcctgcggatgtgctggttgat
catttgccgtcgctgacggtggatgaaacggcttacgggcgtcttgcacacggccaatcg
gctagcttagccattggtgcgcttgagcctgatgcgctggcaagactttattacgctgag
acgtttatcggccttggcgttgtaaaaggggcgcaggaagtagctcccaagcggctgtta
agtaccgtcgctatctcgtaa
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