Halomonas sp. MS1: NF683_09620
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Entry
NF683_09620 CDS
T09972
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hams
Halomonas sp. MS1
Pathway
hams02024
Quorum sensing
hams03060
Protein export
hams03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NF683_09620 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NF683_09620 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NF683_09620 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hams02044
]
NF683_09620 (ffh)
Enzymes [BR:
hams01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NF683_09620 (ffh)
Secretion system [BR:
hams02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NF683_09620 (ffh)
Eukaryotic Sec-SRP protein
NF683_09620 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
NAT10_TcmA_helicase
AAA_16
cobW
ArsA_ATPase
AAA_30
AAA_33
YqeC
nSTAND3
nSTAND_NTPase5
AAA_14
KTI12
MMR_HSR1
AAA_31
APS_kinase
ResIII
6PF2K
Thymidylate_kin
AAA_19
KAP_NTPase
DO-GTPase1
DnaB_C
ParA
AAA_28
DUF7890
SLFN-g3_helicase
ScmC
NACHT
NPHP3_N
TsaE
Motif
Other DBs
NCBI-ProteinID:
UTD57436
LinkDB
All DBs
Position
2122446..2123864
Genome browser
AA seq
472 aa
AA seq
DB search
MFQNLSERLSQTLKSIKGQARLTDDNIKDTLREVRKALLEADVALPVVKAFIERVRERAV
GQEVSKSLSPGQQFVKIVQQELEAIMGEANEGLSLKGSPAVVLMAGLQGAGKTTSVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAKEVQVDFFASRSDQKPVDIATAAIKHAKI
QFHDVVLVDTAGRLAIDEAMMAEIQALHKAISPEETLFVVDAMTGQDAVNTAKAFHDALP
LTGVILTKADGDARGGAALSVRHITGKPIKFMGVGEKVDALEPFHPDRVASRILGMGDML
SLIEEAERTVDKDKAAKLASKVKKGDGFDLEDFRDQLQQLKKMGGMGGLLGKLPGMGQMA
DMAQGPGPEKELGKLEALINSMTPKERRKPDIINGSRKRRIAAGAGLQVPDLNRLLKQHK
QMQKMMKKAGKKGGMQKMMRGMSGMMGGGGPGGPGGAGGMGGMGGPGGLPWR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaatctgagtgagcgtctttcccagacgttgaagtcgatcaaaggccaagcg
cggctaactgacgacaatatcaaagacaccctgcgcgaagtgcgtaaagcactgttggag
gcagatgtcgccttgccggtggtgaaggcatttattgagcgtgttcgtgaacgtgctgtt
ggccaggaagtctcaaagagcctctcgccaggccagcaattcgttaaaatcgtccagcaa
gagctggaagcgatcatgggcgaagccaatgaaggcttatccctaaaaggctcacctgcg
gtcgtgttgatggcaggcttgcaaggggcgggtaaaaccacctctgttgctaaactggcg
cgttacctgcgtgaacgcgaaaagaaaaaagtgctggtggtctccgccgacgtttatcgt
ccagcggcgattgatcagctagagacgctggcaaaagaagttcaggttgatttctttgcg
tctcgttccgatcagaagccagtggatattgccacggcggcgatcaaacacgccaaaatt
cagttccatgatgtcgtattagtcgataccgccgggcggctggccatcgatgaagcgatg
atggccgaaatccaggcgctgcataaagcaatttcaccggaagaaacgctgtttgtggtc
gatgccatgaccggccaggatgcggtgaatacggcgaaagcatttcacgatgcactgccg
ctgaccggggtgattctcaccaaggccgacggtgatgcccgtggcggtgcagcactttcg
gtacgccatatcactggtaagcccatcaagttcatgggggttggtgagaaagtagacgcc
ctagagcctttccatccggatcgtgtggcatcacggattctgggtatgggcgacatgctg
tcgctgatcgaagaagccgagcgcacggtagataaggacaaagccgccaagctggccagc
aaggtcaagaagggtgacggttttgatctggaagatttccgcgatcagttacagcagctc
aaaaaaatgggcggcatgggtggcctgcttggcaagctgcctggcatggggcaaatggct
gatatggcacaaggccctggtccggaaaaagagcttggcaagctggaggcattgattaac
tcaatgacccccaaagagcgccgcaagcccgatatcatcaatggttcgcgcaaacgccgt
attgcagcgggtgctggcctgcaagtacctgacctgaatcgcctgctaaaacagcataag
cagatgcagaaaatgatgaaaaaagcaggcaaaaaaggcgggatgcagaaaatgatgcgc
ggcatgtcgggcatgatgggcggcggcgggccgggtggtcctggcggcgccggtggcatg
ggcggtatgggtggccccggcggtcttccctggcgttaa
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