Halomonas sp. MS1: NF683_09705
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Entry
NF683_09705 CDS
T09972
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hams
Halomonas sp. MS1
Pathway
hams00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NF683_09705 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hams01007
]
NF683_09705 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hams03016
]
NF683_09705 (lysS)
Enzymes [BR:
hams01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NF683_09705 (lysS)
Amino acid related enzymes [BR:
hams01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NF683_09705 (lysS)
Transfer RNA biogenesis [BR:
hams03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NF683_09705 (lysS)
Prokaryotic type
Other AARSs
NF683_09705 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UTD57450
LinkDB
All DBs
Position
2142526..2144040
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AA seq
504 aa
AA seq
DB search
MANQDASSLDNENHLIAERRAKLAARRERAAEQGKSAFPNDFRRDSLTVELHDLLGEKDK
AELETLDHQASVAGRVMRKRGPFIVIQDVAGQIQLYVDKKGLPADVLEDIKGWDIGDIVA
ARGPVHKSGKGDLYVMMVEAQLLTKSLRPLPDKFHGLTDQEARYRQRYVDLIMNPQSRKV
FETRAAVISSMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELY
LKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAQ
EVLGTTTIEYQGASYDFGKPFQRLTLRQAILDHGDGITDADLDTLEAAQAVAEKLGIKVK
ESWGLGKVQTEIFEEVAEHKLDQPTFITEYPAEVSPLARRNDANPFVTDRFEFFVGGREI
ANGFSELNDAEDQAERFREQAAEKDAGDLEAMYFDADYVRALEYGLPPTAGEGIGIDRLV
MLFTDSPSIRDVLLFPAMRPEASE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaagacgcgtcttctctcgataacgaaaaccacctaatcgctgagcgccgt
gccaagctcgcggctcgccgtgagcgcgccgctgagcaaggtaagagcgctttcccgaac
gattttcgccgtgacagcctcacggttgagctacacgacttgctgggcgaaaaggataaa
gcggagcttgaaacgcttgatcatcaagcgtcggtggctggtcgcgtcatgcgtaagcgt
ggcccgtttatcgtgattcaagatgtggctggccaaatccagctctacgtggataaaaag
ggcttgcctgctgatgtgcttgaggacattaaagggtgggatatcggtgatatcgtcgct
gcccgtggcccagtacacaaatcgggtaagggcgacctgtacgtgatgatggtagaagcg
cagctgttgaccaagagcctgcgtccgctgccggacaagttccacggcctgaccgatcag
gaagcgcgttatcgccagcgctacgtagacctgatcatgaacccgcagtcgcgtaaggta
tttgaaactcgcgcggcggtaatcagctccatgcgccgcttctttgaagctcgcggcttt
atggaagttgaaacgccgatgctgcagccgatccccggcggtgcggcagcgcggccgttt
attactcaccacaatgcgctggatattgatatgtacctgcgtattgcaccggagctttac
ctcaagcgtctggtggtgggtggtttcgagaaggtttttgaaatcaaccgtaatttccgt
aacgaagggttatctacacgacataatcctgagttcaccatggtcgaattctattgggcc
tacgcggattatcgtgacctgctcgatatgaccgaagccatgctgcgcacggcggcccaa
gaagtgctgggcaccacgacgatcgagtaccaaggcgctagctatgacttcgggaagccg
ttccaacgcctaacactacgccaagcgattcttgatcatggcgacggcatcaccgatgcg
gatttggatacgctggaagccgcacaagcggttgcagaaaagctgggcattaaagtgaag
gagagctgggggctgggtaaagttcagaccgagatcttcgaagaggtggctgagcacaag
ctggaccagccgacatttattactgaataccccgcagaagttagcccgctggcgcgtcgt
aacgatgctaatcctttcgttaccgaccgttttgagttctttgtcggtggccgagaaatt
gccaacggcttctcagagcttaatgacgccgaagatcaggctgaacgcttccgcgaacag
gccgccgagaaagatgccggtgacctggaggcgatgtattttgacgctgattacgtgcgc
gcgttggagtatggcttgccgccaacggcgggtgagggaattggcattgaccgtttagtg
atgctgtttaccgatagcccctctattcgggacgtactgctgttcccagcgatgcgcccc
gaagccagcgagtaa
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