Halomonas sp. MS1: NF683_10200
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Entry
NF683_10200 CDS
T09972
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hams03016
]
NF683_10200 (tcdA)
Transfer RNA biogenesis [BR:
hams03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NF683_10200 (tcdA)
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Paralog
GFIT
Motif
Pfam:
ThiF
NAD_binding_7
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
Cons_hypoth95
Spermine_synth
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UTD57544
LinkDB
All DBs
Position
2243557..2244381
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AA seq
274 aa
AA seq
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MSSDYDFRFGGIRRLYGQRAATAFRHAHVVVVGVGGVGSWTVEALARSGIGKLTLIDLDD
VCVSNVNRQLHALDATIGQPKVDVLAERCRLIAPEINVVADSAFVTPTNLAERIPDDADH
VVDAIDSVIAKAALIAWCKRRKLPITVTGAAGGQTDPTRIQVADLTRTEHDPLLSKVRSR
LRRDYGFSRNPKRRFSVECVYSDEQLVYPGADGEVCLQKPGNGDATRLDCASGFGAATFV
TGTFGFVAASKVLERLAKKAAKPMPSTTQQEESE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggattatgactttcgctttggcggcattcgccgcttgtatggccaacgtgct
gccacggcgtttcgccatgcccatgttgtggtagtgggtgtgggtggcgtggggagctgg
acggtagaagcgctggcgcgttctggcattggcaagctaacgctgattgatttggatgac
gtatgcgtgtccaacgtcaatcgtcagctccatgcgttagacgccaccattggccagcca
aaggtggacgtgttggccgagcgttgtcgcttgattgccccggagataaacgtcgtagcc
gacagtgcttttgtcacgcccactaaccttgccgagcgtatccccgatgatgccgatcat
gtggtggatgccattgatagcgtgatcgccaaggcagcgctaatcgcttggtgcaaacga
cgtaaactaccgattaccgtgacgggagctgcaggcggtcagacggatcctacccgcatt
caggtggcagatttaacacgtactgaacacgatccactgctttctaaagtgcgctcgcgg
ctgcgccgtgattatggtttttcgcgtaatcccaagcggcgcttttccgttgagtgtgtc
tattctgatgagcagttggtgtaccctggcgctgacggcgaagtctgtctgcaaaagccc
ggcaacggtgatgctacccgcttagactgcgcctcaggctttggcgccgccacctttgtc
actggtacgtttggttttgtcgctgcctcaaaagtgctcgaacggttggctaaaaaagcc
gctaagcccatgccttcaacgacccaacaagaggaaagtgaatga
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