Halomonas sp. MS1: NF683_12170
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Entry
NF683_12170 CDS
T09972
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hams
Halomonas sp. MS1
Pathway
hams00730
Thiamine metabolism
hams01100
Metabolic pathways
hams01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NF683_12170 (thiC)
Enzymes [BR:
hams01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NF683_12170 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UTD53931
LinkDB
All DBs
Position
complement(2685510..2687456)
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AA seq
648 aa
AA seq
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MTKTLETETVKTKTSKSKTSHFLAETAQVDAAAIQPLPASRKVYVEGSRPDIRVPFREIT
LSPTKTSSIDEENPPLLVYDTSGPYTDPAANNDLRKGLPALRRAWIEERNDTEFLDGPTS
EYGNRRANDPTLAQLRFDLTRTPRRAKPGKNVTQLHYARQGIITPEMEFIAIRENQRRQT
LGTAEVERILGHQHPGQSFGAKLPEEITPEFVRDEVARGRAIIPNNINHPESEPMIIGRN
FLVKINGNLGNSAVTSSIEEEVDKMTWGIRWGSDTIMDLSTGQNIHETREWIIRNSPVPI
GTVPIYQALEKVNGIAENLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRVTGI
VSRGGSIMAKWCLYHHQESFLYTHFEEICEICKQYDVAFSLGDGLRPGSVADANDEAQFA
ELETLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDKQLEACHEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHP
AAQRRDNALSKARFEFRWEDQFNLGLDPDTAREFHDETLPKDSAKVAHFCSMCGPKFCSM
KISQEVRDTYRDRTPENAAESDSEAVKRGMQEQAEKFRREGSELYQEV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagactttagaaactgaaactgtaaaaactaagacctcaaaaagtaaaaccagc
cattttttagctgaaactgctcaggtcgatgcggctgccattcaaccgctgcccgcctcg
cgcaaggtgtacgttgaaggctcacgaccagatatccgcgtgccgtttcgggaaatcacc
ctgtcgcccactaaaaccagcagcattgatgaagagaatccgccgctactggtgtacgac
acctctggcccttacaccgacccagccgccaacaacgatttacgcaaaggcttgcctgcc
ctgcgccgcgcctggattgaagagcgcaacgataccgagttccttgacggccccaccagt
gagtacggcaatcgccgcgctaacgaccccacgcttgcccagttgcgttttgatttaacg
cgcaccccacgccgagcaaaaccgggtaagaatgtcacccaactgcactatgcgcgccag
ggcattattactcctgaaatggaatttattgccattcgcgaaaaccagcgccgccaaaca
ttaggcaccgctgaagttgagcgtattcttggtcatcaacatcctggccagagctttggt
gcaaaattgccggaagagatcacgccggaatttgtgcgcgacgaagtcgcccgtgggcgc
gcaattatccccaacaatatcaaccacccagaatccgagccgatgattattggccgtaac
ttcctggtgaagattaacggcaacctgggtaactcggcagttacctcgtcgattgaagaa
gaagtcgacaaaatgacctggggtatccgctggggatcggacaccatcatggacctttcc
acgggccagaacattcacgagacccgtgagtggattatccgcaactcgccggtgccgatt
ggtacagtgccgatctatcaagcgcttgagaaggtcaacggcattgccgaaaacctgacc
tgggaagtgttccgcgacaccttgattgaacaggctgaacagggcgtggattacttcacc
attcacgcgggcgtactgttgcgctatgtgccaatgactgccaaccgagtgaccggcatt
gtcagccgtggcggctctatcatggccaagtggtgcttgtaccatcaccaggaaagtttc
ctgtatacccacttcgaagagatctgtgagatctgcaagcagtacgacgtagcgttttct
ctgggcgatggcctgcgccccggctcagtcgccgatgccaacgacgaagcgcagttcgct
gagctggagaccctgggtgagctgacgaagatcgcctggaaacatgatgttcaggtgatg
atcgaaggccctggccatgtgcccatgcacctgattaaagagaacatggataagcagctt
gaggcgtgtcacgaggcacctttctataccctcggcccactgaccaccgatatcgccccc
ggctacgaccacattacctccggcattggcgcggccatgatcggctggtttggctgtgca
atgctctgctatgtgacgccgaaggagcacttgggtctgccgaataaagatgacgtcaaa
accggcatcatcacctacaaaattgctgcccacgcagcagacttggccaagggtcacccg
gcagcacagcgtcgcgataacgcgctttccaaggcacgttttgaattccgctgggaagac
cagttcaatctggggctagacccggacaccgcccgtgaattccacgacgaaaccttgccg
aaggactccgccaaagtggcgcacttctgctccatgtgtgggccgaagttctgctccatg
aagatcagccaggaagtacgcgatacctatcgggaccgcacaccggagaatgccgctgaa
agcgattccgaggccgttaagcgtggcatgcaggagcaagccgagaagtttcgccgagaa
ggtagcgaactgtaccaggaagtttaa
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