Halomonas sp. MS1: NF683_12735
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Entry
NF683_12735 CDS
T09972
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hams
Halomonas sp. MS1
Pathway
hams00020
Citrate cycle (TCA cycle)
hams00190
Oxidative phosphorylation
hams00650
Butanoate metabolism
hams00720
Other carbon fixation pathways
hams01100
Metabolic pathways
hams01110
Biosynthesis of secondary metabolites
hams01120
Microbial metabolism in diverse environments
hams01200
Carbon metabolism
Module
hams_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hams_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hams_M00149
Succinate dehydrogenase, prokaryotes
hams_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NF683_12735 (sdhA)
00650 Butanoate metabolism
NF683_12735 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NF683_12735 (sdhA)
00720 Other carbon fixation pathways
NF683_12735 (sdhA)
Enzymes [BR:
hams01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NF683_12735 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
GIDA
FAD_binding_3
Pyr_redox_2
SPESP1
Pyr_redox_3
FAD_oxidored
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UTD54036
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All DBs
Position
2801688..2803460
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AA seq
590 aa
AA seq
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MSNLRSLTFDAIIIGGGGSGLRAALELAKSGKKTAVLSKVFPTRSHTVSAQGGITCAIAS
SDPNDDWRWHMYDTVKGGDYIADQDAAEYMCSEGPKAVFELEHMGLPFSRFDNGRIYQRP
FGGQSKNFGEGGQAARTCAAADRTGHALLHTLYQNNLKNNTTFLNEWYAVDLVKNSNGDV
VGCIAMCIETGEVVHVKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGFPMQDME
MWQFHPTGIYGAGTLVTEGCRGEGGYLINKDGERFMERYAPNAKDLAGRDVVARSMVMEI
LEGRGCGEKGDHVFLKLDHLGEEVLGKRLPGIVELSKTFAHVDPAKDPIPVVPTCHYMMG
GIPTNIHGQAITQDESGNDHIVNGLFACGEAACVSVHGANRLGGNSLLDLVVFGRAAGMF
IEGALNEGIDYLDASESDIESAMKRITRWNESEGGESIPELKAELQDIMQTSFGVFREEK
NMQEGVKKLADLRSRIANAHLPDKSNAFNTARVEALELDNLMEVAEATAIAALERNESRG
AHSRYDYPDRDDVNWLKHSLYFPATKELKKRDVNFKPKTVDTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccttcgtagcctgacatttgacgccattatcatcggtggcggtggctctggc
ttgcgtgctgctttagaacttgccaaatctggtaaaaagacagccgtactgtccaaagtg
ttcccgacacgctctcacacggtttctgcccagggtggtattacttgcgccatcgcatcg
tcagatccgaacgatgattggcgctggcacatgtacgacactgttaaaggcggcgactac
attgccgaccaagacgcagctgagtacatgtgttcagaaggcccgaaagcggtgtttgaa
cttgagcacatggggctgccgttctcgcgctttgataatggccgtatttatcagcgtccg
tttggtggccagtcgaaaaacttcggcgaaggcggtcaggcggcacgtacctgtgcagcc
gctgaccgtactggccacgcactgcttcacacgctctaccaaaacaacctcaagaacaac
accacgttcttgaatgagtggtacgcggtagatctggtgaaaaacagcaacggtgatgtg
gtgggttgtatcgccatgtgcatcgaaactggcgaagttgtccacgttaaatcgaaagcc
actgttctggccacgggtggtgcaggtcgtatctacgcctctactactaatgccttgatc
aatactggcgatggtatcggtatggcgctacgtgctggcttcccgatgcaggacatggaa
atgtggcagttccacccgaccggtatttatggtgcgggtacgctggtcactgaaggttgc
cgtggtgagggtggttacctgatcaataaagatggcgaacgcttcatggaacgttatgcg
ccgaacgccaaagacttggcaggccgtgacgttgttgctcgctcaatggtcatggaaatt
ctggaaggtcgtggttgtggcgagaagggcgatcacgtcttcttgaagcttgatcacctg
ggcgaagaagttcttggtaaacgcctgccgggtatcgttgagctgtcgaaaacgtttgct
cacgttgatcctgctaaagatccgattcctgttgtgcctacatgtcactacatgatgggc
ggtattccgaccaatattcatggtcaggcaattacccaggacgaaagcggcaacgatcat
atcgttaacggtttgtttgcttgtggtgaagcggcgtgtgtatcggttcacggtgctaac
cgcttgggcggtaactcactgctggatctggtggtcttcggtcgtgcggcgggtatgttt
attgaaggcgcgctgaacgaaggtattgattacctggatgcttctgaatctgatatcgaa
tcagcgatgaaacgtattacgcgctggaatgaatcggaaggtggtgagagcattcctgag
cttaaagctgagcttcaagacatcatgcagacctctttcggtgtattccgtgaagagaag
aatatgcaggaaggtgtcaagaaactggcggatctgcgcagccgaattgccaatgcgcac
ctgcctgacaagtccaatgcgttcaacacggcgcgtgttgaagctttagaacttgataac
ctaatggaagtggcagaagcaacggcgattgctgcccttgagcgtaatgagagccgtggt
gcgcactcgcgctacgactatcctgaccgtgatgatgtcaactggctgaagcactcgctt
tacttcccggccacgaaagagctgaagaagcgcgacgttaacttcaagccgaaaactgtt
gatacattcgagcctaaggttcgcacctactaa
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