Halomonas sp. MS1: NF683_13055
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Entry
NF683_13055 CDS
T09972
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hams03016
]
NF683_13055 (trmA)
Enzymes [BR:
hams01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
NF683_13055 (trmA)
Transfer RNA biogenesis [BR:
hams03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
NF683_13055 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
Methyltransf_4
Methyltransf_31
Methyltransf_11
MTS
Methyltransf_12
TRM5-TYW2_MTfase
DREV
Methyltransf_23
Nitrate_red_gam
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
UTD54098
LinkDB
All DBs
Position
2880315..2881427
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AA seq
370 aa
AA seq
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MAIPTVEPERYAEQLAEKQAYVEKTFAAFTTPTLEVYPSPPSHYRQRCEFRIWHEDDDLF
YAMFEVDSDNPKNKRVVRLDQFPVASEHINALMPRLREAFLASDELRRRLFQVEFLTTLS
GEALVTLIYHRPLGEAWEAEARALEEALGIMIIGRSRKQRLVLTRDHVWERLTVDGRELV
YQQVENSFTQPNAHICQTMLSWAREATAGRQDEDLVELYCGNGNFTIALADNFRRVLATE
ISRTSVASANVNLDANGVTNAQVARMSAEEFALALKGEKTGRRVTEMALDAYEFSTVLVD
PPRAGLDAESCHQISEYAQIVYISCNPATLAENLTILTQTHHIERFALFDQFPFTEHCEC
GVLLTRKSAG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttggcgatccccactgtagaaccagaacgctacgccgaacagctcgctgaaaagcaagcc
tacgtggagaaaacctttgcagcgttcaccacgcccacgcttgaagtctatccctcaccg
ccaagccactatcggcaacgctgcgaatttcgtatttggcatgaagatgatgacctcttc
tacgccatgtttgaggtcgattcggataatcccaaaaacaagcgtgtcgtgcgtttggat
cagttccccgtcgccagtgagcatatcaatgcgctgatgccgcgtctgcgagaagcgttc
cttgccagcgatgaacttcgtcggcgcttatttcaagttgagtttttaaccacgttgtct
ggtgaagccttggtgacgctgatctaccaccgcccgttaggcgaggcctgggaagccgaa
gcgcgcgcactggaagaggcgcttggcatcatgattattggccgttcgcgcaagcagcgc
ttggtgctaacccgagatcatgtgtgggagcgcttaacagttgatggtcgtgagctggtt
tatcagcaggtcgaaaacagctttactcagccaaatgcgcatatctgccagaccatgctt
agctgggccagggaggccaccgctggaaggcaggatgaagacttggtggagctttactgt
ggtaacggtaactttaccattgcgttagcggataacttccgccgcgttttggcgacggaa
atttcgcgcacctcggttgccagcgctaacgtcaatctggacgctaacggtgtaaccaat
gctcaggtcgcaagaatgtccgctgaagagttcgccttggcgctaaagggcgagaaaaca
ggtcgccgagtgacggagatggcgttggatgcgtatgagttttccaccgtgctagtcgat
ccaccaagagcgggtctggacgccgaaagttgtcatcaaatcagcgaatacgctcaaatc
gtctatatttcatgcaatccggcaacgctagctgaaaacttaaccatactgactcaaaca
caccatattgaacggttcgcgctttttgatcagtttccgtttaccgagcattgtgaatgc
ggtgtattactcacacgaaagagcgctgggtaa
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