Halomonas sp. MS1: NF683_14125
Help
Entry
NF683_14125 CDS
T09972
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hams
Halomonas sp. MS1
Pathway
hams00071
Fatty acid degradation
hams00280
Valine, leucine and isoleucine degradation
hams00310
Lysine degradation
hams00362
Benzoate degradation
hams00380
Tryptophan metabolism
hams00410
beta-Alanine metabolism
hams00640
Propanoate metabolism
hams00650
Butanoate metabolism
hams00907
Pinene, camphor and geraniol degradation
hams00930
Caprolactam degradation
hams01100
Metabolic pathways
hams01110
Biosynthesis of secondary metabolites
hams01120
Microbial metabolism in diverse environments
hams01200
Carbon metabolism
hams01212
Fatty acid metabolism
Module
hams_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NF683_14125 (fadB)
00650 Butanoate metabolism
NF683_14125 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NF683_14125 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NF683_14125 (fadB)
00310 Lysine degradation
NF683_14125 (fadB)
00380 Tryptophan metabolism
NF683_14125 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NF683_14125 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NF683_14125 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NF683_14125 (fadB)
00930 Caprolactam degradation
NF683_14125 (fadB)
Enzymes [BR:
hams01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NF683_14125 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NF683_14125 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NF683_14125 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NF683_14125 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Methyltransf_31
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
UTD54287
LinkDB
All DBs
Position
3101400..3103574
Genome browser
AA seq
724 aa
AA seq
DB search
MIYQGNAITVERRDTQGGNDIAKLTFDLKDESVNKLSSAVVAELGEAVKALQAESGLQGL
MISSGKDAFIVGADITEFHSLFDKGEEYLVEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMSEKAKIGLPETKLGILPGWGGCVRLPRLIGADNAIEWIAGGTENRA
NAALKVGAVDAVVTHELLEEAALDILDRANAGDLDYQARREEKKAPLNLNAIEQMMAFET
AKGFVAGKAGPHYPAPVASIKVIQKGAGETRARAQAIEAKAFAKLALSSVAFNLVGLFLN
DQVVKKKGSKYEKQSQPVKQTAVLGAGIMGGGIAYQSASKGTSIIMKDINDEAIELGLKE
ARKLFAKQVERKKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEAVVENPKVKDAVLTEVE
GMVSENTILTSNTSTISINRLAKNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQRVDKVMEKFGWPMG
PAYLLDVVGLDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNKRLGQKNDKGFYAYEEDK
KGKPKKVTDEQAYALVKDVVKEQKEFSDEDIIARMMVPLCLETVRCLEDGIVETPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLAENLAEELGPLYAPTEKLRQMAQNNEQFYA
GSQA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggagcgtcgtgacacccaaggtggcaatgac
atcgctaagctcactttcgatctgaaagatgagtccgttaataagctgtccagtgctgtt
gtggcagagttgggcgaggcagtaaaagcgcttcaagctgaaagcggcctacaggggttg
atgattagcagcggcaaagatgcgtttattgtcggcgctgacatcaccgaatttcacagc
ctttttgacaaaggcgaagagtatctcgtcgagatgaaccttaaggttcacgacatcttc
aatgcgattgaagacctgccttttccaaccgtgacggccattaatggcttggcactgggt
ggcggctgcgaagtactgttgaccaccgatttccgagtaatgagcgagaaagccaaaatt
ggcttgcctgaaaccaagctaggcattctgccaggttgggggggatgtgtacgtttaccc
cgcttgattggtgcggataacgccattgagtggattgctggcggcactgaaaatcgtgct
aacgcagcacttaaagtcggcgcagtcgatgctgtcgttactcacgagctgcttgaagaa
gccgcgctggacattctagaccgtgccaatgccggtgatttagattaccaggcgcgccgt
gaagagaagaaagcaccgcttaatcttaatgccattgagcaaatgatggcgtttgaaact
gccaaagggtttgtcgctggcaaggctggccctcactatcctgcgccggtagcgtcgatt
aaggtgattcagaaaggcgctggcgagacccgtgcccgcgcccaggcgattgaagcaaaa
gcatttgccaagctagcactcagtagcgttgcctttaacttggttggcttgttccttaac
gatcaagttgtgaagaaaaaaggtagcaaatacgagaagcagtcgcagcccgttaagcag
accgctgtgctgggtgctggcattatgggcggtggtatcgcctatcagagtgccagcaaa
ggcacgtccatcataatgaaagatattaacgatgaggcgattgagctgggtctgaaagag
gcgcgtaagctatttgctaagcaggtagagcgtaaaaagctgacgactgagcagatggct
gaaaagctgaccaacattcgccccacgctttcttacggtgatttcggcaatgttgatcta
gtggttgaagctgtcgttgaaaatcccaaggtcaaggacgccgtgctgaccgaagtggaa
ggcatggtgagcgaaaataccatccttacctccaacacctcgacgatttctatcaaccgc
ctagccaaaaaccttaagcgtccagaaaacttctgcggcatgcacttttttaaccctgtg
catcgtatgccgctggtggaagttattcgtggcgagaagacgtcagatgcagcggtggcc
gccacagttgcctacgctcgtgcaatgggcaaaaccccgattgttgtgaatgactgcccc
ggctttttggtcaaccgcgtactgttcccctattttggtggctttagcttcctggtagag
cagggcgctgatttccaacgcgttgacaaagtgatggaaaaatttggctggcccatgggt
cctgcttacctgctagacgtagtggggctagatacagcggtacacgctaacgaagtgatg
gcggaaggcttcccggatcgcatggcgcgtgacggcaaaaccgctattcaggtgatgtac
gacaataagcgtctgggccagaagaacgataaaggcttctatgcctatgaagaagataag
aaaggcaagcctaagaaagttaccgacgaacaagcctacgcgctggtgaaagacgtcgtg
aaagagcagaaagagttttctgatgaagacattatcgctcgcatgatggtaccgctttgt
ctggaaactgttcgttgccttgaagatggcatcgtggaaactcccgctgaagccgatatg
gcattaatctacggcatcggtttccctcccttccgcggtggcgcactgcgctacattgac
gcgatgggtgttgccgaattcgtgaagctagccgaaaaccttgcggaagagttaggcccg
ctttacgcgcccactgagaagctgcgtcagatggctcaaaataacgagcaattttatgct
ggctctcaggcctaa
DBGET
integrated database retrieval system
