Halomonas sp. MS1: NF683_16230
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Entry
NF683_16230 CDS
T09972
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hams
Halomonas sp. MS1
Pathway
hams03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF683_16230 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_16230 (ung)
Enzymes [BR:
hams01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NF683_16230 (ung)
DNA repair and recombination proteins [BR:
hams03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NF683_16230 (ung)
Prokaryotic type
NF683_16230 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
UTD54685
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All DBs
Position
3526292..3526975
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AA seq
227 aa
AA seq
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MANPLPDDWNQWLGQEFQADYMSALKAFLAQEKSAKKVIYPHSSHWFRAFELTPLASVKV
VILGQDPYHGPNQAHGLCFSVQPGIQVPPSLVNIYKELAADVGFTPVRHGFLESWATQGV
LLLNTALTVEQGNAASHRGKGWEHFTDCAIETVSRYAEPCVFLLWGSHARQKKVLIDQSR
HLVLESPHPSPLSAHRGFFGNHHFSRANQFLAEHGRSPIEWQLPETP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccgctacccgacgattggaatcaatggcttgggcaagaatttcaggctgac
tatatgtcagccctgaaagcatttttggcccaagaaaaatcagccaaaaaagttatctac
ccgcactcatcgcattggtttcgcgcttttgagctgacacctttagcctctgtgaaagtc
gttattctagggcaagacccttatcacggccccaaccaagctcatggattgtgcttttcg
gtgcagccgggtatccaagtgcctccctctttagtcaatatttataaagaattagctgct
gatgtggggtttacgcccgtgcgacacggctttttggagtcttgggcaacccagggtgtg
ctgctgcttaacactgcattaacggttgagcagggtaatgccgcttctcatcgtggcaag
gggtgggaacacttcaccgactgcgcgattgaaaccgtcagtcggtatgctgaaccgtgc
gttttcttgttgtggggcagccatgcgcgccagaagaaagtcctgattgatcagtcgcgc
cacttggtgttggaatccccgcatccttcgccactctcagcgcatcgaggcttttttggc
aatcaccacttttcccgtgccaatcagtttttagcagagcatgggcgttcaccgattgag
tggcaattgccggaaaccccttaa
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