Halomonas sp. MS1: NF683_17285
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Entry
NF683_17285 CDS
T09972
Name
(GenBank) FAD-binding oxidoreductase
KO
K26064
D-lysine oxidase
Organism
hams
Halomonas sp. MS1
Pathway
hams00310
Lysine degradation
hams01100
Metabolic pathways
hams01120
Microbial metabolism in diverse environments
Module
hams_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
NF683_17285
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
ApbA
Pyr_redox_2
Pyr_redox_3
Pyr_redox
NAD_binding_9
MurD-like_N
3HCDH_N
HI0933_like
F420_oxidored
FAD_binding_3
NAD_binding_2
NAD_Gly3P_dh_N
Glyco_transf_4
Sacchrp_dh_NADP
FAD_binding_2
UDPG_MGDP_dh_N
TrkA_N
Epimerase
AlaDh_PNT_C
GIDA
Shikimate_DH
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
UTD54883
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Position
complement(3749489..3750730)
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AA seq
413 aa
AA seq
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MARQTVVLGAGMVGVSIAWHLQQRGHQVTLVDRRQPGRETSFGNAGIIQREAVRPYAFPR
DMKTILSVLPNKRVDIRYRPAGMINAASPLLSYWHNSSSRHYKKIVPEYASLIQLCLKTH
GPMIEAAKADHLVRREGWLEIYRTPGELAKRVKEAQDARDNFGVQFDVLDRAALEAKEPD
LGSDIIGAIHWLDPWTVADPGGLVAAYADAFVQQGGRILQTDIEGLKQQGERWQVDTAAE
CLEADEVVVALGPWAGSWLKGLGYHFPTFVKRGYHMHYATQPSKKLHYWLMDAEVGYLLA
PMNAGVRLTTGAELDRLESPADEQQLAAAEKVARTIFPLAERRDASAWKGARPCLPDMKP
VIGPAPKHRGLWLAFGHGHQGFTLGPATGQLLADMIEGKPTEIDMAPFRADRF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcaaacggtggtgttaggggcaggtatggtcggtgtcagcattgcatggcac
ttgcagcagcgtggtcatcaagtaacgctggttgatcgccgccaacctggtcgtgaaacc
tctttcggcaatgctggcattatccagcgcgaagcggttcgtccttatgctttcccgcgg
gatatgaaaaccatcctgagcgtgctgccaaacaagcgtgttgatattcgttatcggcct
gccggcatgattaatgctgcttcgccgctgttgagctactggcataactcttccagccga
cactataaaaaaatagtgcctgagtatgcgtcattgatacagctctgcttgaagactcac
ggccccatgattgaagcggcaaaggctgatcatttggttcgccgggaaggctggttggaa
atttatcgcacgcccggagagctagcaaaacgtgtaaaagaagcacaggacgcccgtgac
aattttggtgttcagtttgacgttttggaccgcgctgcattagaggctaaagagccagat
ttaggtagcgatattattggtgctattcactggcttgacccttggacagttgccgaccca
ggtgggctggttgccgcttatgccgatgcttttgtccagcagggtggacgtatcttgcaa
actgatattgaggggttgaagcaacaaggagagcgctggcaagtcgatacggctgctgag
tgcttagaagcagatgaggttgtcgttgcgctagggccatgggcaggtagctggctgaaa
ggcttaggctatcatttcccgacctttgttaagcgtggctatcacatgcactacgccaca
cagccttctaaaaagcttcattactggttaatggatgcggaggtgggttacttgcttgcg
cctatgaatgcaggcgttcggttaaccaccggggctgagcttgaccggcttgagtcgcca
gcagatgagcagcagttagctgctgcagaaaaagttgcgcgcacgatattccccctcgct
gagcgtcgcgacgcctctgcttggaaaggcgcacgaccatgtttgcctgacatgaagcct
gttatagggccggctcccaagcatcgtggcctgtggttagcttttggacatgggcatcag
ggatttaccctaggtcctgctaccgggcaattgctggcggatatgatagaaggtaagccg
actgagattgatatggcgcctttcagggctgaccgtttctaa
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