Halomonas sp. MS1: NF683_19130
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Entry
NF683_19130 CDS
T09972
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hams
Halomonas sp. MS1
Pathway
hams03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF683_19130 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_19130 (xthA)
Enzymes [BR:
hams01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NF683_19130 (xthA)
DNA repair and recombination proteins [BR:
hams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NF683_19130 (xthA)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UTD55232
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All DBs
Position
4130127..4130960
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AA seq
277 aa
AA seq
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MRLVSFNINGIRARLHQLQALIDTQQPDVIGLQETKVHDSEFPLADVEAMGYHVFYYGQK
GHYGVALMCRQKPQAVFYGFPDDEEDAQRRMIGVRLLADNGEPVTVWNGYFPQGENVEHP
TKFPHKARFYRQLASLLQNQHHPEEQLAIMGDFNISPEDQDIGIGEPSRKRWLREGKASF
QPIEREWLEGIKAWGLSDSYRLCHPDNSEWFSWFDYRSKGFDREPKRGLRIDYILVSKPL
AECVTGAGIDYELRGMERPSDHAPTWSDFALTLAQTD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttggtctcgtttaatatcaatggcattcgggcacggcttcatcagcttcaagcg
ctgattgatacgcagcagccagacgtcattggcctacaggaaaccaaagtacacgacagc
gagtttcctctggctgacgttgaagccatgggctatcacgttttttattacggtcaaaaa
ggccattacggggttgccttaatgtgtcggcaaaaaccccaagcggtattttatggcttc
cctgatgatgaggaagacgcccaacgccggatgattggcgtacggttactagccgataat
ggtgaaccggtcactgtttggaatggctacttcccccagggtgaaaacgttgaacaccca
actaaattcccacataaagcgcgcttctatcggcagttggcaagcctgctacaaaaccag
caccatcctgaagagcaactggcgatcatgggggatttcaacatatcgccggaagatcag
gatattggcattggtgaaccgagccgcaaacgctggttgcgcgagggcaaagccagcttt
cagcctatcgagcgagaatggcttgaaggtataaaagcgtggggccttagcgacagctat
cggctgtgccacccagataacagtgagtggttcagctggtttgactatcgctcaaaaggt
tttgaccgcgagccaaaacgcggcctgcgcattgactacatcctggtgtctaaaccgctt
gccgaatgcgtcactggcgcaggcatcgattatgaactgcgcggcatggagcggccttcc
gatcacgctcctacctggagtgattttgcgctgacgcttgcccagacagactaa
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