Halomonas sp. MS1: NF683_19440
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Entry
NF683_19440 CDS
T09972
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hams
Halomonas sp. MS1
Pathway
hams00470
D-Amino acid metabolism
hams00550
Peptidoglycan biosynthesis
hams01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NF683_19440 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NF683_19440 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hams01011
]
NF683_19440 (murD)
Enzymes [BR:
hams01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NF683_19440 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hams01011
]
Precursor biosynthesis
Amino acid ligase
NF683_19440 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_8
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UTD57728
LinkDB
All DBs
Position
complement(4194543..4195937)
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AA seq
464 aa
AA seq
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MVRVANGITVVIGLGISGQAICRHLARQGVPFMVADTRAEPPGLHAFQNENPNVEVYCGP
LTALDFTDAYEVVVSPGVDPHSPGLDGLLERYNPATGEPVLVGEIALFVRAVNAPIAAIT
GSNAKSTVTTLLGEMARVAGVKAAVGGNLGTAALDLLAEYPDAELYILELSSFQLETTPH
LGAKAAAFLNLCEDHLDRHGDMMGYRRAKQRIFRGAQSVIVNADDALTWPESSVDHIERF
TAFAPAGNDWGVVEKGGELTLFQGDTAWLSTAALSMAGRHNYANALAALAMGKALGFAKA
PMCQALTAFKGLPHRSEVIARINDVMWVNDSKGTNVGATLAAIQGISASLTGKVILLAGG
VGKGADFTPLAMPLAESAKTAVLFGADARRLEAAISSAVPVHLVNDLTQAMEVAWEIAEP
GDCVLLSPACASLDQFVNYQARGDAFRDWVEQKHKQHNHSGERL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atcgtgcgagtcgcaaatggaatcaccgttgttattggcctgggaatttctgggcaagct
atttgtcggcatttggcgcgtcaaggcgtgccatttatggtggcagatacgcgagctgaa
cctccggggctacacgcttttcagaacgaaaaccccaatgttgaggtttattgtggtccg
ttaacggcgcttgattttaccgatgcctacgaagtggtggtcagccctggtgtcgatcct
cattcgccagggcttgatggcttgctagagcgttataatccagcaacgggggagcccgta
ctggtaggtgagattgctttgtttgttcgcgcggtgaatgcgccgatcgccgctattact
ggctctaatgccaagtcaactgttacgacattactcggcgagatggctagagtggctggt
gttaaagctgcggtggggggaaatttgggtacggctgcattggatttattagctgaatac
ccagatgccgagctttacatccttgaactctcaagctttcagctggaaacaacgcctcat
ttgggtgctaaagcggctgcttttttaaacctctgtgaagatcatttagatcgtcacgga
gatatgatgggttaccgccgcgctaagcagcgtatttttcgcggtgcacaatcagtcatt
gtcaacgcggatgacgcgctcacttggccagagtcgtctgtggatcatatagagcgtttc
acggccttcgcacccgcaggtaatgactggggggtagttgaaaaaggcggcgagttaacg
ctgttccaaggtgatactgcttggcttagcacagcagctctcagcatggcagggcggcat
aactatgccaatgcacttgcagcattggcaatgggcaaggcgttgggctttgcaaaagca
ccgatgtgccaagcattaactgcttttaaggggctgccccatcgtagtgaagtcatcgct
cgtatcaatgacgttatgtgggtgaatgattcaaaaggtactaacgttggcgctacgctg
gccgccattcaaggcatcagcgcatcgctgacagggaaagtaatattattggccggtggt
gtcggcaaaggtgctgactttacccctctggcgatgcctctggcagagagcgctaaaact
gcggtgctatttggtgctgacgcacgccgtcttgaggccgctatctcatctgctgttcca
gtgcatctagtcaacgatttaactcaagcgatggaagtggcctgggaaatagctgaaccc
ggcgactgtgtattgctgtcacccgcctgcgcaagcctagatcagtttgtcaattaccag
gcgagaggcgatgcctttcgggattgggttgagcaaaagcataaacagcataatcactca
ggagagaggttatga
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