Halomonas sp. MS1: NF683_20245
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Entry
NF683_20245 CDS
T09972
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hams03000
]
NF683_20245 (csiR)
Transcription factors [BR:
hams03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NF683_20245 (csiR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
Motif
Other DBs
NCBI-ProteinID:
UTD55443
LinkDB
All DBs
Position
complement(4373617..4374327)
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AA seq
236 aa
AA seq
DB search
MNSSFFPDEKADAKENLGIRAYKLLKIDIIKGTFQPDEKLRMSVLKARYDLGIGPLREAL
SQLVAEHLVVAISQRGYRVAPMSLAELNDIYDARAQVEAMMLGLAIERGDDAWEANILAK
SYQLAKLTEMSSSEGLLDIWDRRHSDFHTAMVVGCNSPHLMKVRAGLFDKVQRYRFLWLK
ETVFSAQALEAKRQEHAALVDATLERRKDEAVALMHEHLMSPVPIIAQVMRQQSVA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatctttcttcccagacgaaaaggcggatgccaaggaaaacttgggtattcgt
gcctacaagctacttaaaatagatattattaaaggcacttttcagcctgacgaaaaatta
cggatgagtgtgcttaaagcgcgctatgacctgggtattggtcctctgcgagaagcactt
tcccagcttgttgctgagcatctagtggtggctattagccagcgtggctatcgtgtggca
cccatgtcgctcgctgagcttaacgatatatacgatgcccgggcgcaggttgaagcgatg
atgttggggcttgcgatagagcgtggcgatgatgcctgggaagctaatatcttggcaaag
tcttatcaattagcaaagctgacggaaatgagttcgtcagaagggctgttagatatttgg
gatagacggcatagtgattttcacaccgcgatggtggttggctgcaactctccgcatttg
atgaaagtgcgcgctgggctgtttgataaagttcagcgctaccgctttttgtggcttaag
gaaaccgtgttttctgctcaagcccttgaagcaaagcgccaagagcatgccgccttagta
gatgccacgcttgagcgccgaaaggatgaagcagtggcattgatgcacgaacacttgatg
tcccctgtgccgattattgcacaggtaatgcgccaacaaagtgtcgcatag
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