Halomonas sp. MS1: NF683_20925
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Entry
NF683_20925 CDS
T09972
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
hams
Halomonas sp. MS1
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NF683_20925
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
OB_PDCD11
S1_RRP5
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
UTD55572
LinkDB
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Position
complement(4544616..4546991)
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AA seq
791 aa
AA seq
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MDVKQRIISRLATELNVRPEQVSATVELLDGGATVPFIARYRKEVTGALDDIQLRQLDER
LRYLRELEERREAVLAAIDEQGKLDATLKATIQAAETKQRLEDLYLPFKKKRRTKAQIAR
EAGLEPLADALLASPQLNPESEAAQYLRSAEGDIPAIEDAKAALDGAKQILMERFAEDPE
LIGRLRERLWQEGELSARVLDGKQQEGAKFSDYFEHDEKLAKVPSHRALAMFRGRNEGIL
SLAIRLPGEEDAPIHPAQVAIAKQVGISDEGRPADKWLSEVVRWTWRVKLYTALETELLG
RLREQAELTAIEVFAANLKDLLLAAPAGQKVTLAIDPGLRTGCKVAVVDATGQFIDQATI
YPHAPQNRWDESLNVLAKLVKQHGVQLVAVGNGTASRETDKLAGDLLKALAPEHRLSKVM
VSEAGASVYSASEYASRELPDLDVTVRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV
SQVQLSRSLEVVIEDCVNAVGVDLNTASSALLSRVAGLSAAIAENIVAQRNVKGAFTSRK
ELLEVSRLGPKTFEQCAGFLRISNAENPLDASAVHPEAYTLVERIAKQNSRDIKGLIGDS
ATLKALKPADFADERFGVPTVSDILKELDKPGRDPRPEFKAAEFREGVETLKDLKLGMVL
EGTVTNVTHFGAFVDIGVHQDGLVHISALSDRFIDDPRSVVKAGDIVTVKVMSVDIPRKR
VGLSMRLDDEPEQAQAASNSTNDEPRKPARSQRSASSGQNGRGQRQGGKSSEAAAPMGAL
GAALLKAKQGK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaacaacgtattatttcacgcttagccactgagctaaacgtacggcctgaa
caggtctccgccacggtagagcttctggatggtggcgctaccgtgccgtttattgctcgt
tatcgtaaagaggtaacgggtgccctcgatgatattcagctgcgccaactggatgagcgc
ctgcgctatttgcgcgagctggaagagcgccgtgaagccgtactagcggctatcgatgag
caaggcaagctggatgccacgctaaaagcaacgattcaggcagctgagacgaagcagcgc
ctagaagacttatacctaccgtttaagaaaaagcgccgcacgaaagcgcaaattgcccgt
gaagcgggcttagagccactggcggatgccctgttggccagtccgcagcttaatcccgaa
agcgaagccgcgcagtacctgcgctctgcagaaggcgatattccagccattgaagatgcc
aaagccgcccttgatggtgctaagcaaattctcatggaacgcttcgccgaagaccctgaa
cttattggccggttgcgtgaacggttatggcaagagggcgaattaagtgcccgcgtgcta
gatggcaagcagcaggagggcgcaaagttctctgactacttcgaacatgacgagaaactg
gccaaggtgccatctcaccgtgcgcttgctatgttccgtggtcgcaacgaaggtattcta
agtctggcgattcgtctgcctggcgaagaggacgcgccaattcatccggcccaggtcgcc
attgccaaacaagtgggtattagcgatgaaggccgccccgccgacaaatggttgagcgaa
gtagtgcgctggacgtggcgtgtaaagctctataccgcgcttgaaaccgagctgttgggt
cgcctgcgcgagcaggcagagttaaccgctatcgaggtgtttgccgccaacctgaaagac
cttttgctggcagcacctgcagggcaaaaagtgacgctcgcgattgacccgggcctaaga
accggctgcaaggttgcggtggtggatgcgaccggtcaatttatcgaccaagcgacgatt
taccctcatgcgccgcagaatcgctgggacgaatcgctcaatgtgctcgctaaactggtt
aaacagcatggcgttcaactcgttgctgttggcaatggtactgccagtcgcgaaaccgac
aagctggcaggtgatctgctgaaggcgttagcgcccgaacatcgtttaagtaaagtcatg
gtgtctgaggccggtgcgtcggtttactccgcgtcggaatacgcctctcgcgagctgcca
gatcttgatgtcaccgtacgcggcgccgtctctattgctcgccgcctgcaagacccgctt
gcagaactggtgaaaatcgagccgaaatctatcggtgttggtcagtatcagcacgatgtc
tcccaggtgcagctgtcgcgtagtctagaagtcgtgatagaagactgtgttaacgcagtc
ggtgtggatctcaatacggcatctagcgcattgctttcacgtgttgctgggctaagtgct
gccattgctgaaaatattgttgcccaacgcaacgttaaaggtgccttcacaagccgtaaa
gagctgttggaagtcagccgccttgggccaaagacgtttgagcagtgtgctggtttttta
cgcatcagcaacgccgaaaatccgctggatgccagcgccgttcacccagaggcttatacg
ctggtagagcgtattgccaagcagaatagtcgagatataaaaggtctgattggtgatagt
gcaacgctaaaagcactgaaacccgccgacttcgctgatgagcgttttggtgttcctacc
gtcagcgatattctcaaagagctagataagccaggacgcgacccgcgccctgagtttaag
gcggctgaattccgtgaaggcgtcgaaacgctcaaagacctgaagctgggcatggtactg
gaaggtaccgtcaccaacgtgacccacttcggtgcctttgtagatattggcgttcatcaa
gacgggctcgtgcatatttcagcgctctctgaccgctttatcgatgacccccgcagtgta
gtaaaagcaggcgatatcgttaccgttaaggtgatgagcgtggatatcccccgcaagcgg
gtagggctttcaatgcgtttggatgatgagccagagcaggcgcaagccgcttcaaattcc
actaacgacgagccccgtaagcctgcgcgtagtcagcggtcggccagttctggacagaac
ggtcgtggtcaacgccagggaggaaagtccagcgaagcagcggcaccaatgggcgcgctc
ggcgcagcactgcttaaagcaaagcagggcaaatag
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