Halobacillus amylolyticus: MUO15_01325
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Entry
MUO15_01325 CDS
T09510
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hamy
Halobacillus amylolyticus
Pathway
hamy03410
Base excision repair
hamy03430
Mismatch repair
hamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUO15_01325 (recJ)
03430 Mismatch repair
MUO15_01325 (recJ)
03440 Homologous recombination
MUO15_01325 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hamy03400
]
MUO15_01325 (recJ)
DNA repair and recombination proteins [BR:
hamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MUO15_01325 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MUO15_01325 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUO15_01325 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
ThiG
Motif
Other DBs
NCBI-ProteinID:
UOR12209
LinkDB
All DBs
Position
248667..250988
Genome browser
AA seq
773 aa
AA seq
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MLQSKMKWNFTYIEEDQTSGSFPIKGMSDVTKRLLEKRKLTEPDVIDRFLHPSLDDIHDP
FLMEDMGRAIERVQSAIHKGENILVFGDYDADGVSSTTVLIEALTEAGAQADYYIPNRFT
EGYGPNEAAFRQAAVDGYSVIITVDTGIAAIHEADIAKELGIDLIITDHHEVQEILPQAY
AIIHPKTSEAYPFKELAGVGVAFKFATALLGRFPEHLLDMVAIGTIADLVPLHDENRVLV
SYGLKAISRSNRKGIQALRTVAGLDGAIDEETIGFTIGPRVNAVGRLQDASPAVELFLTD
DRAEADHLASLINQLNQERQKIVADTAKEAEEMIKSGEQELSNVIVVAKEGWNPGVLGIV
ASKLVRTFDRPAIVLAIDPEKQQAKGSARSIDAFDLFANCMEVRDRFIHFGGHAQAAGMT
LDANEVDNLRQQLSDLAGQKLSSEDYQQVLDVEMSIEIEDVSLQQIEEINKLRPFGMGNP
KPLFHVKQSPKELRRIGSRKNHLKITFQNQSAKLDGVAFGMGDLYPHISPHAELEVVGEL
SVNEWNGKKNVQIMVKDMQVSSWQLFDLRGSKHIEKQISLSDGETYAAVSFQNTTEVPFQ
LPVFAPSELAGLDEVDGLLLVDLPKDLSDLSNLLNEVRPGKLYACYQVDEGAFLQTWPTR
DHFKWFYGMLVKRKTFNLKQDREKLAARKGWDRSMVDFISQVFFELDFVKIEDDFITINS
TPSHRDLTDSILYQERKKQLYVEQSLYYSTYKELKSWLDRQRNSLKEEVVNGL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaagtaaaatgaaatggaattttacatatattgaagaggatcaaacatccggg
tcatttcctatcaaagggatgtcggacgtaacgaaaagactattagaaaaaaggaagtta
accgagcctgacgtgatcgatcgatttcttcatccgtctttagatgatatacatgatccg
tttttaatggaggatatgggacgggcaattgaacgagttcagtcagctattcataaaggt
gaaaatattttagtatttggtgattatgatgcagatggtgtcagctcgacaacggttttg
atcgaagctttgacagaagccggggcccaagctgattactacataccaaaccgttttaca
gaaggatatggaccaaatgaagcagcctttaggcaagccgctgtggatggatattctgtc
attattacggtggatacagggatagcggctattcatgaagcagatattgcaaaagagctt
ggaatcgatctgattattacagatcaccacgaggtacaagaaatccttccacaagcctat
gcaatcattcatccgaaaacttctgaagcctacccgtttaaagagcttgctggagtaggc
gtggcttttaaatttgctacagctttattaggccggttccccgaacatctattagatatg
gtcgcgataggaacgatagctgaccttgttcctttacatgatgaaaatcgcgtgctcgtc
tcttacggtttgaaggcaatatcgcgttcgaatcgaaaaggtatacaagccttaaggacc
gtagcgggattagatggtgccattgatgaagaaacgataggttttaccatcggcccaaga
gtaaatgctgttgggcgcctgcaagatgcaagtccggctgtggaactgtttttaacggat
gaccgtgccgaagctgatcacctggcttcacttattaatcagcttaaccaagaacggcag
aaaatcgttgctgatacagcaaaagaagccgaagaaatgataaaaagtggggagcaggag
ctgagcaatgtcatcgtagtagctaaagagggatggaatccgggagttctcggtattgtc
gcctcaaaattagtccgaacatttgaccgcccagccatcgttttagcgattgaccccgaa
aaacaacaagcaaaaggttcagctcgtagtattgatgcttttgacttgtttgccaattgt
atggaagtcagggatcgtttcattcattttggaggacacgcccaagcagctggcatgaca
cttgatgcgaatgaggtggataacttaagacaacaattgagtgatttagccgggcagaag
ctgtcatcagaggactatcagcaagtccttgatgttgaaatgtctatagaaatagaggac
gtatccctgcagcaaatagaggaaattaataaattgcgaccgtttgggatgggaaatcct
aagccgttgtttcatgttaaacaatcacctaaagaacttagacgaattggaagccgtaaa
aaccatttgaagattacgtttcaaaatcagtctgctaaactggatggtgttgcttttggt
atgggggacctgtatccgcacatatcgccacatgctgagcttgaggtggttggagaactt
agcgttaacgaatggaacggcaaaaaaaatgtgcaaattatggtcaaggatatgcaggtg
tcctcatggcagctttttgatctaaggggatccaagcacattgagaaacaaataagtctt
tccgacggggaaacgtatgcagctgtaagttttcagaacacgaccgaagttcctttccaa
cttcccgtctttgccccctcagaattggctggactggacgaagtggatggactcttgctt
gtagatttaccgaaggatctatctgatttgtccaatttgttgaacgaggtaaggccaggg
aaattatatgcctgttatcaagttgatgagggtgcttttctgcaaacatggcctacacgt
gatcactttaaatggttttatggtatgctagtaaagcgtaaaacgttcaaccttaaacaa
gatcgagaaaaactggcagcccgaaaagggtgggaccggtcaatggtcgattttatttca
caggtgttttttgaactagattttgttaaaatagaggatgattttattacgattaattca
acaccttcacatagagatttgacagattcaattctttatcaagaaagaaaaaaacaatta
tatgtcgagcagtctttatattattcgacttataaagagttgaagagttggcttgataga
cagaggaatagcctcaaggaggaagtagtaaatggattataa
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