KEGG   Halobacillus amylolyticus: MUO15_05645
Entry
MUO15_05645       CDS       T09510                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hamy  Halobacillus amylolyticus
Pathway
hamy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hamy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MUO15_05645 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hamy03019]
    MUO15_05645 (rnjA)
Messenger RNA biogenesis [BR:hamy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MUO15_05645 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 RMMBL DUF4453
Other DBs
NCBI-ProteinID: UOR12983
UniProt: A0ABY4HDM8
LinkDB
Position
1064345..1066012
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VQNQDKIKGLFITHGHEDHIGGIPYLLREINIPIYAGKLAAGLLRNKLDEHGLLRNTKMH
TIQEDDVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLAR
MAEIGKEGVLALLSDSTNSEVPGFTKSERVVGQSIQDIFTRVDGRLIFATFASNIYRLQQ
VVESAVRNNRKVAVFGRSMESSIRIGQELGYIRAPKETFIDTQQLNRLPAHEVVILCTGS
QGEPMAALSRIANGTHRQIQIMPKDTVVFSSSPIPGNTISVSRTINKLYRAGADVIHGPL
NDIHTSGHGSQDEMKLMLRLIQPKFFMPIHGEYRMLKEHVKLSEECDIDPDNCFVMDNGD
VLALGKDEAMIAGKVPSGAVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
ASGPDIISRGFVYMRESEDLIKEAQKLVSTHVEKVMDRRTTQWSEIKNEITDTIAPFLFE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaagtttgttaaaaatgaccaaacagctgtgttcgccttaggtggactcggtgagatt
ggtaaaaacacatacgctgttcaattccaggacgaaatcatcctcattgatgctggaatc
aaatttcctgaagacgagcttttaggaattgattacgtaatccctgattacacctattta
gttcaaaaccaggacaaaataaaagggttatttattactcacggtcacgaggaccatatt
ggtggtatcccttatctgttgcgtgaaattaacatccccatttatgctggaaagcttgca
gcaggacttttacgtaacaaattagatgaacatggattacttcgaaataccaaaatgcac
acgatccaagaggacgatgtgattaaattccgcaaaacatccgtttcctttttccgtacg
acacatagtatccctgactcgtatggaattgtagtaaaaactcctcctggtaacatcgtc
catacgggagattttaaatttgatttcacccctgttggtgaaccggctaaccttgcaaga
atggctgagattggtaaggaaggtgtactcgcactattatccgatagcacgaatagtgaa
gtacctggatttactaagtcagaacgagtagtcggacagagcatccaagatatatttacg
cgtgtggatggcaggctaatatttgcaacattcgcatcaaatatataccgcctacagcag
gttgttgagtccgctgttagaaataatcgtaaagttgctgtgtttggccgaagtatggaa
tcttctatcagaattgggcaagagcttgggtatatccgcgcacctaaggagacatttatt
gacactcagcaactcaatcgtctgcctgctcatgaagtggttattttatgtacaggatct
caaggtgaaccaatggcagcactatctcgtattgctaacggaactcaccgtcagatccag
attatgcccaaagatacagtcgtgttttcctcttccccaatccctggtaacacgattagt
gtaagtcgtacaattaataagctttatcgtgcaggtgccgatgttattcacggaccttta
aatgatattcacacttctgggcacggcagccaagatgaaatgaagttgatgctgcgttta
atccagcctaaattctttatgccgattcacggtgaatatcgtatgcttaaagaacatgtg
aagctaagtgaagaatgtgacattgatccagacaactgttttgtaatggacaatggcgat
gttctggctcttggcaaagacgaagcaatgattgcaggtaaagttccttctggtgccgtc
tacgttgacggaagtggaatcggtgatattggcaacatcgtacttcgagaccgccgtatc
ctatcagaagaaggactagttatcgttgtcgttagtataaacatgaaggaattcaagatt
gcctcaggtcccgatattatttctcgtggcttcgtttacatgagagaatcagaagactta
attaaagaggcccaaaagcttgtaagcactcatgttgaaaaagtaatggaccgtcgtaca
actcagtggtctgaaattaaaaatgaaattactgacaccattgcacctttcctatttgaa
aaaacaaaacgtcgtccaatgatccttcctatcattatggaagtttga

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