Halobacillus amylolyticus: MUO15_05645
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Entry
MUO15_05645 CDS
T09510
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hamy
Halobacillus amylolyticus
Pathway
hamy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hamy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUO15_05645 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamy03019
]
MUO15_05645 (rnjA)
Messenger RNA biogenesis [BR:
hamy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MUO15_05645 (rnjA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
RMMBL
DUF4453
Motif
Other DBs
NCBI-ProteinID:
UOR12983
UniProt:
A0ABY4HDM8
LinkDB
All DBs
Position
1064345..1066012
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AA seq
555 aa
AA seq
DB search
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VQNQDKIKGLFITHGHEDHIGGIPYLLREINIPIYAGKLAAGLLRNKLDEHGLLRNTKMH
TIQEDDVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLAR
MAEIGKEGVLALLSDSTNSEVPGFTKSERVVGQSIQDIFTRVDGRLIFATFASNIYRLQQ
VVESAVRNNRKVAVFGRSMESSIRIGQELGYIRAPKETFIDTQQLNRLPAHEVVILCTGS
QGEPMAALSRIANGTHRQIQIMPKDTVVFSSSPIPGNTISVSRTINKLYRAGADVIHGPL
NDIHTSGHGSQDEMKLMLRLIQPKFFMPIHGEYRMLKEHVKLSEECDIDPDNCFVMDNGD
VLALGKDEAMIAGKVPSGAVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
ASGPDIISRGFVYMRESEDLIKEAQKLVSTHVEKVMDRRTTQWSEIKNEITDTIAPFLFE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgttaaaaatgaccaaacagctgtgttcgccttaggtggactcggtgagatt
ggtaaaaacacatacgctgttcaattccaggacgaaatcatcctcattgatgctggaatc
aaatttcctgaagacgagcttttaggaattgattacgtaatccctgattacacctattta
gttcaaaaccaggacaaaataaaagggttatttattactcacggtcacgaggaccatatt
ggtggtatcccttatctgttgcgtgaaattaacatccccatttatgctggaaagcttgca
gcaggacttttacgtaacaaattagatgaacatggattacttcgaaataccaaaatgcac
acgatccaagaggacgatgtgattaaattccgcaaaacatccgtttcctttttccgtacg
acacatagtatccctgactcgtatggaattgtagtaaaaactcctcctggtaacatcgtc
catacgggagattttaaatttgatttcacccctgttggtgaaccggctaaccttgcaaga
atggctgagattggtaaggaaggtgtactcgcactattatccgatagcacgaatagtgaa
gtacctggatttactaagtcagaacgagtagtcggacagagcatccaagatatatttacg
cgtgtggatggcaggctaatatttgcaacattcgcatcaaatatataccgcctacagcag
gttgttgagtccgctgttagaaataatcgtaaagttgctgtgtttggccgaagtatggaa
tcttctatcagaattgggcaagagcttgggtatatccgcgcacctaaggagacatttatt
gacactcagcaactcaatcgtctgcctgctcatgaagtggttattttatgtacaggatct
caaggtgaaccaatggcagcactatctcgtattgctaacggaactcaccgtcagatccag
attatgcccaaagatacagtcgtgttttcctcttccccaatccctggtaacacgattagt
gtaagtcgtacaattaataagctttatcgtgcaggtgccgatgttattcacggaccttta
aatgatattcacacttctgggcacggcagccaagatgaaatgaagttgatgctgcgttta
atccagcctaaattctttatgccgattcacggtgaatatcgtatgcttaaagaacatgtg
aagctaagtgaagaatgtgacattgatccagacaactgttttgtaatggacaatggcgat
gttctggctcttggcaaagacgaagcaatgattgcaggtaaagttccttctggtgccgtc
tacgttgacggaagtggaatcggtgatattggcaacatcgtacttcgagaccgccgtatc
ctatcagaagaaggactagttatcgttgtcgttagtataaacatgaaggaattcaagatt
gcctcaggtcccgatattatttctcgtggcttcgtttacatgagagaatcagaagactta
attaaagaggcccaaaagcttgtaagcactcatgttgaaaaagtaatggaccgtcgtaca
actcagtggtctgaaattaaaaatgaaattactgacaccattgcacctttcctatttgaa
aaaacaaaacgtcgtccaatgatccttcctatcattatggaagtttga
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