Halobacillus amylolyticus: MUO15_18110
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Entry
MUO15_18110 CDS
T09510
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hamy
Halobacillus amylolyticus
Pathway
hamy02020
Two-component system
hamy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hamy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUO15_18110 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUO15_18110 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hamy03021
]
MUO15_18110 (rpoN)
Transcription machinery [BR:
hamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUO15_18110 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
DUF5113
HTH_21
HTH_IclR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UOR11484
LinkDB
All DBs
Position
complement(3582538..3583848)
Genome browser
AA seq
436 aa
AA seq
DB search
MKLELSQKQKMVMTPDLNQAITMLQYSTVEMEQFIQEQAMENPLIELEENNHDISFREDY
PVSKSHSKSLNTHSEVNPLDYLKSEDKGMWEHLLEQAQFLDIEERERTILRYLILNLDEN
GYLPLSTSDISQLLNVTEQKSLYAIDLLQQLEPAGVGARGLKECLLLQLRAYHPNDRMTE
QVITDYLELVANNKWKEISSSLEIPFEEVKSIVTLIQSLDPKPCADIYRTPIRYQVPDII
IEKVREKYTISLNDKFIPTVNMNKQYTTYLGQNNEASNYLNKHYQKYLWLVKSIEQRRLT
ILKITEVMIDKQIDFLTNGVASLKPLTLKNVAEEIDVHESTVSRATKNKVIQTPMGTFEL
RMFFSSKLGKDETGTSAAKVKALLQQLVKNENKRKPLSDQKISAYFRDQEEVNVSRRTIA
KYREELNILSSSKRKV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattagaactttcacaaaaacaaaaaatggtgatgacgcccgacttaaaccaagcg
ataacaatgcttcaatatagtacggtggaaatggaacagttcattcaggaacaagcaatg
gaaaacccactaattgaactagaagaaaataatcatgacatctccttcagggaagactat
cccgtttctaaaagtcattcaaaatccctaaatacccattccgaagtaaacccgcttgat
tatctgaaaagtgaagataaagggatgtgggagcatttattagaacaagcacaatttctt
gatattgaggaaagagaacggactatattgcgttatctaattcttaacctggatgaaaat
ggctatttgccattaagtacatcagatatttcccaattattaaatgttactgaacaaaaa
tccctatacgccatcgacctccttcaacaacttgagcccgcaggtgttggagccagagga
ttaaaagagtgtctattattacaattacgagcatatcaccctaacgatcgaatgactgag
caagtaattaccgattatcttgagctagttgctaataacaaatggaaggaaatttcctcc
tccctggaaataccgtttgaagaggttaaatccattgttactctcattcaaagtcttgat
cctaaaccttgcgctgatatttatcgtacacccataagatatcaagttccagatattatc
atagaaaaggtgagagagaaatacaccatttcccttaacgataagttcataccaacagta
aatatgaacaaacagtacacaacatacctaggacaaaacaacgaggcatccaactaccta
aataaacactatcaaaaatatttatggttagtaaaaagtatagaacaacgccgcttgacc
attttaaaaattaccgaggtcatgattgataaacaaattgattttttaactaacggtgtt
gcctcgcttaaaccgcttacgttaaagaatgtcgccgaggaaatcgatgttcacgaatca
acggttagccgcgcaacaaaaaataaagtcattcaaacacctatggggacatttgagctt
cgaatgtttttctcttccaaacttggaaaagacgagaccggcacttctgcggctaaagta
aaagcattgttacagcaattggttaagaacgagaataagagaaaaccactttctgatcaa
aaaatctccgcatactttagggaccaggaggaagttaacgtgtcacggagaacgatcgcc
aagtatagggaagaattaaatattttatcatcatcaaagcgtaaggtttaa
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