Halomonas sp. M1: P8S55_06515
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Entry
P8S55_06515 CDS
T10932
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hamz Halomonas sp. M1
Brite
KEGG Orthology (KO) [BR:
hamz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hamz03009
]
P8S55_06515 (dbpA)
Enzymes [BR:
hamz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P8S55_06515 (dbpA)
Ribosome biogenesis [BR:
hamz03009
]
Prokaryotic type
rRNA helicases
P8S55_06515 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
WFE72741
UniProt:
A0AAX3SBD7
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All DBs
Position
complement(1441700..1443097)
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AA seq
465 aa
AA seq
DB search
MSDTSFASLALSPALLTNLDSLGYHDMTPVQAQSLPPMLAGRDVLAQAKTGSGKTAAFGL
ALLAALRVDAFVVQGLVLCPTRELADQVADELRRLARGLPNVKVLTLCGGAPFGPQLGSL
EHGAHIVVGTPGRIDEHLRKGSLTLGSLTTLVLDEADRMLDMGFQATIDDIIADTPADRQ
TLLFSATFPDEQASGGLATMTRGVMRDPVTVKVAELHDATTIDQHFYEVTNEEARFAALQ
QLLLVYRPATSVVFCNTKRETQAVAEQLTDAGFSAVALNGDLEQKDRDRRLILFANQSAS
ILVATDVAARGLDIAQLDAVFNYQIARELDVHVHRVGRTGRAGASGVACTLVTPKEHYRL
ERLEGLLEQPITTEPLPKPQHSVPFEPPMATLQLAGGKKDKLRPGDILGALTSEGGLSGE
QVGKIKVLARSAYVAVEHSVVQKAQAKLERDKLKGRAFRVRRIRF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacacctcttttgcatcgcttgcgctctcacccgcgctgttgacgaatctagac
tcccttggctatcacgacatgacgccggttcaggcgcaaagcctgccgccgatgctggcg
gggcgcgacgtgctagcccaagccaaaaccggctctggtaagaccgccgcatttggctta
gcgctgctggctgcgcttcgtgtagacgcgtttgtcgttcaaggcctggtgctgtgcccc
actcgggagctagccgatcaagtagccgacgaactgcgccgtttggcgagagggttgccc
aacgttaaggtgcttaccttgtgcggtggtgcaccatttgggccgcagctgggttcgcta
gagcacggcgcgcatatcgtggtgggcacacccggacgcattgacgagcatttacgtaaa
ggctctctaacgctgggctcgctgaccaccttggtactggatgaagctgaccgtatgttg
gatatgggcttccaggcgaccattgacgacatcattgccgacacgcctgcggatcgccag
acgctgctgttcagtgcgaccttcccggatgagcaggcatctggtggccttgccaccatg
acccgcggcgtaatgcgtgatccggtcactgtcaaagtggctgagcttcacgatgccact
accattgatcagcacttttatgaagtcactaacgaagaggcgcggtttgccgcccttcag
cagctgctgctggtctatcggccggcgaccagcgtggtgttttgcaacaccaagcgcgaa
acccaagcggtggcggagcaacttaccgatgctggatttagcgccgtagcgctcaacggc
gacttagagcaaaaagatcgtgaccgtcgactaatcctgtttgccaaccagagtgcgtct
attctggtcgccacggatgttgcggcgcgcggtttggatattgcccagttagatgcggtg
ttcaactatcaaattgcccgtgagcttgatgttcacgtgcatcgggtagggcgcaccggg
cgcgcgggcgctagcggtgttgcctgtaccttggtaacccctaaagaacattatcggcta
gagcggctggaaggcttgctagagcagccgattaccacggaaccattgcctaaaccccag
cactctgtgccgtttgagccgcctatggcaacgctacagttggcaggcggtaaaaaagat
aagctgcgcccgggggatattcttggtgcgttgaccagcgaaggtgggctgagtggtgag
caggtcggtaaaattaaagtcttggcgcgcagcgcctatgtggcggtggagcatagcgtc
gttcaaaaagcccaagccaagcttgagcgtgacaaactgaaagggcgtgccttccgcgtt
cgccgtatccgtttttga
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