Halomonas sp. M1: P8S55_08765
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Entry
P8S55_08765 CDS
T10932
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hamz Halomonas sp. M1
Pathway
hamz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hamz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8S55_08765 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamz03019
]
P8S55_08765 (recQ)
03400 DNA repair and recombination proteins [BR:
hamz03400
]
P8S55_08765 (recQ)
Enzymes [BR:
hamz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8S55_08765 (recQ)
Messenger RNA biogenesis [BR:
hamz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8S55_08765 (recQ)
DNA repair and recombination proteins [BR:
hamz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8S55_08765 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
WFE69882
UniProt:
A0AAX3S2Y3
LinkDB
All DBs
Position
1929039..1930874
Genome browser
AA seq
611 aa
AA seq
DB search
MHGDPHPAALKVLQEVFGYDNFRGPQQAIIEHVIAGGDALVLMPTGGGKSLCYQIPALLR
EGTAIVVSPLIALMQDQVAALEQNGVRAAYLNSSLDYHEAVDVENRLRAGELDLLYVAPE
RLATARMQMLLEQTHIALFAIDEAHCVSQWGHDFRPEYRQLSHLHQRFPQVPRIALTATA
DVPTRGDIMEHLQLQNAALYNSGFDRPNIRYHIAENQGNAKEQLLRFIREHHNGEAGIVY
CLSRRKVEETAAWLERQGLTALPYHAGLPAEQRQHHQTRFLREDGVIVVATIAFGMGIDK
PDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVITLRQMQQGSSAADQQK
RIEQQKLDAMLGLCEIISCRRQALLHYFGDHLDAPCGNCDNCLTPPETWDATVAAQKALS
CVYRTEQRFGVTYLVDVLLGKSNERITRFGHDRLSTYGIGKDLSANEWKALFRQLIASGF
LSVDMEGHGGIKLTANAKPVLRGEHDLTLRKPINKPSKAKAARRGSKVSATHSHGPLWEA
LRQHRRELAEAQGVPAYVIFHDATLAEMIEQKPQSLEALGAISGIGARKLTDYGEGFLDV
ILQHQESGQSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgacccccatcctgcagccctaaaggtgctgcaggaggtctttggctacgac
aactttcgcggcccacagcaggctattattgagcatgtgattgctggtggcgatgcgctg
gtgttgatgcccaccggcggtggcaaatcgctgtgctatcagatccccgcgctactgcgc
gaaggcaccgctattgtggtttcgccgctgatcgcgctaatgcaggatcaagtagcagcg
ctggaacagaacggggttagggcagcctacctcaactcaagcctcgattatcacgaggcg
gttgatgtggaaaatcgcctgcgggcgggcgagctggatcttttgtatgtggctcccgag
cggctggccacggcgcgcatgcagatgctgctggaacagacccacattgccctgttcgcc
atcgatgaagcccactgcgtctcccaatggggtcacgattttcgcccggagtatcgccag
ctctcccatctgcatcagcgctttccccaggtgccgcgcatcgccctgaccgccaccgcc
gacgtgcccacccggggcgatatcatggagcacctgcagcttcaaaacgcggcgctatac
aacagcggctttgaccgccccaacattcgctaccatatcgccgaaaatcagggcaacgcc
aaggaacagctgctgcgctttattcgcgagcaccacaatggcgaggcaggcattgtctac
tgcctttcccggcgcaaagtagaggagactgccgcttggctggaacgccaggggctcacc
gcgctgccctaccacgcggggcttcctgccgagcagcgccagcaccaccaaacccgcttt
ctacgtgaagatggcgtgattgtggtggccaccatcgccttcggcatgggcatcgacaag
ccggacgtgcgctttgtggcgcacctcaacctccccaagagcatcgaagcctactaccaa
gagactggccgtgccgggcgcgacggcctgcctgccgatgcctggatggcctatgggctt
caggacgtaatcaccctgcgccagatgcagcagggctccagcgccgctgaccagcaaaaa
cgcattgagcagcagaagctcgacgctatgctggggctatgtgaaatcattagttgccgc
cgccaggcgctgctccactactttggcgatcacttggacgcgccctgcggcaactgcgat
aactgcctgaccccacccgagacctgggacgccaccgtggctgcacaaaaggcgctgtca
tgcgtctatcgcaccgagcagcgctttggtgtgacctatctggtggatgtcctgttgggc
aaaagcaacgaacgaatcacccgctttggccacgacagactcagcacctacggcataggc
aaagacctctccgccaacgaatggaaggcgctctttcggcagctgattgctagcggtttt
ttaagcgtggatatggagggccatggcggcatcaagctaaccgctaacgcaaagccggta
ctgcgcggcgagcatgacctcaccctgcgcaagccaatcaacaaacccagtaaggctaaa
gccgctcggcggggcagcaaagtctctgccacgcacagccacggcccactgtgggaggca
ctgcgacagcaccgccgggagcttgccgaagcccagggcgtgcctgcctatgtgattttc
cacgacgccaccctggctgaaatgatcgagcagaagccccaaagcctggaggcgctgggc
gcgatctctggcatcggtgcgcgcaagctgacggactacggcgagggctttttggatgtg
atcctgcagcatcaggaatccgggcaaagcagctga
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