Halomonas sp. M1: P8S55_12040
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Entry
P8S55_12040 CDS
T10932
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
hamz Halomonas sp. M1
Pathway
hamz03030
DNA replication
hamz03430
Mismatch repair
hamz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hamz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P8S55_12040 (ssb)
03430 Mismatch repair
P8S55_12040 (ssb)
03440 Homologous recombination
P8S55_12040 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hamz03032
]
P8S55_12040 (ssb)
03400 DNA repair and recombination proteins [BR:
hamz03400
]
P8S55_12040 (ssb)
03029 Mitochondrial biogenesis [BR:
hamz03029
]
P8S55_12040 (ssb)
DNA replication proteins [BR:
hamz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
P8S55_12040 (ssb)
DNA repair and recombination proteins [BR:
hamz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
P8S55_12040 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
P8S55_12040 (ssb)
Mitochondrial biogenesis [BR:
hamz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
P8S55_12040 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
SSB_1
Pro-rich
Motif
Other DBs
NCBI-ProteinID:
WFE70512
UniProt:
A0AAX3S4T6
LinkDB
All DBs
Position
2618499..2619182
Genome browser
AA seq
227 aa
AA seq
DB search
MARGINKVILIGNLGQDPEVRFTPSGTAVANLNLATSDTWMDRQSGQRQERTEWHRIVLF
NKTAEIAQQYLKKGAKVYIEGRLQTRKWQDQNGQDRYSTEIVANDMQMLDGRSGDFQGGG
APQGNYSQGNNPQNNYAQNNAAQGGQPQNAPAQHAPAQNSYGQGNPGQTPPAQNAPQQPG
GYPQQGGAQRSPQPAPQQNQPAPANQNSNYGAPDPGNFDDFDDEIPF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggaattaacaaagtcattttgattggcaacctggggcaagacccagaagta
cgttttaccccgtcgggcaccgccgtggctaacttgaaccttgcgacctccgacacctgg
atggaccgtcagagtggtcagcgacaagagcgtaccgagtggcaccgcattgtgctgttc
aataaaactgccgagattgcccagcagtatttgaaaaaaggcgccaaggtctacattgaa
ggccgcctgcaaacccgtaagtggcaagaccagaatggtcaggaccgttacagcactgaa
attgttgccaatgacatgcagatgcttgatggccgcagtggcgacttccaaggcggcggt
gcgccacagggtaattactctcaagggaataatccccagaataactatgcccagaataac
gccgcacagggtgggcagccccaaaacgccccggctcaacatgcccctgcgcaaaacagc
tatgggcaaggcaacccaggtcagacgccgcctgctcaaaacgcgcctcagcagccgggt
ggttacccacagcagggcggcgcccagcgtagcccgcagcctgctccgcagcaaaatcag
cctgcccccgccaaccaaaacagcaactacggcgcgcctgatccaggtaacttcgacgat
tttgacgacgaaatcccgttctaa
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