Helianthus annuus (common sunflower): 110864680
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Entry
110864680 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110864680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110864680
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110864680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
COG3_N
Motif
Other DBs
NCBI-GeneID:
110864680
NCBI-ProteinID:
XP_021969482
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All DBs
Position
6:10294581..10301316
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AA seq
685 aa
AA seq
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MAGFSFNTNPASSSSPSPFSFASSSSTSPFSFSSNPSSSPSLFGASSAPSNPTFGTPSSS
SASSTSSFGFNFASSSSSTPSSAAPSFGFGASSASTGSTFGFCTTSSSSTGSPFGGSTLF
GSSSSSGGTTATTTTTSLFGSTGLTSTTFGASSIFGASSAAASAPSSTTAATASPVSSPF
GSGLFGSSSGSSLTTFGASPSVATSASSTSSPATSFPSLFGSSSSSSSSATSSSSISSSV
TAQSSSSSTPGFSFLSSSSSSSLTSAAPASSASAFSFPSATATSAPSFSFSTSAAVGNST
GAAASAPSLFGGSSSSASSGFSFGNVTASTGLQASSGLGSSVKAATTAATASATTGASSS
ASTTTPAFSAFGVASSSTTGSTATGSLSSFASPATAAASTGTSSSFLGFQTSSKSVGTPT
PASQPQSTAALSLFGASASLTTTSTVTTTTAQTSSALVVSSSSGTTTSVSTAVASAPKLP
SEITGKTVEEIIKEWNVELQERTSKFRKQANAIAEWDRRILQNRDVLLKLEAEVAKVVDT
QSNLERQLELIETHQQEVDKSLQSVEEEAERIYKDEHGLLLDDEAASTRDAMYEQAEFIE
REMEHMTEQIKSVIQTLNANQGGELEATDGMTPMDVVVRILNNQLSSLMWIDEKAEEFSS
RIQKLAKQGSAADRELMGPKFWLSR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttctccttcaacacaaatcccgcatcctcatcctctccatcaccgttttca
ttcgcatcatcttcatccacatctcccttttcattctcctcaaaccctagctcttcccct
tcgctattcggcgcatcatccgccccctctaaccctacattcggaacaccttcatcatca
tccgcatcttcaacttcatcctttggattcaactttgcctcttcttcatcctccacaccg
tcttccgccgctccctcttttggcttcggtgcttcttctgcttctaccggctcaacgttc
gggttctgtacgacgtcgtcttcttccactggttccccgtttggtggatctactttgttt
ggatccagttctagctccggtggaaccactgctactaccactactacaagtttattcggt
tcgacaggtttgacttcaactacttttggagctagcagcattttcggggcttcttcggct
gccgcttcggctccgagttcaactacagctgctactgctagtccggttagttccccgttt
ggttccggcttatttggctcatcttctggatcatcattgactacttttggggcttctcca
tctgttgccacatcagcatcatcaacgtcatcaccggctacatcatttcctagcttattt
ggctcatcatcgtcatcatcatcatcggctacatcatctagctcgatttcgagttcagtt
acagctcaatctagttcatcgtcaacaccggggttttcgtttctcagttcctctagctca
agctcacttacaagtgctgcaccggcttcttcagcttctgctttttcattcccgagcgcc
acagcaacctctgctccttcgttttcgttttccacgagtgcagctgttgggaattcgaca
ggtgctgcagcgtctgctccaagtttgtttggtggttcatcgtcgagcgcttcgtctggg
ttctcgtttgggaatgtaacagcgtcgactgggcttcaagcgtcttcgggtttgggttct
agtgtgaaagcggcgactacggctgcaactgcgagtgctactactggtgcttctagttct
gctagtacgaccacaccggctttctctgcgtttggtgtggcttcatctagtactacaggc
tcaacagctactggatctttgtcgagttttgcaagccctgctactgctgctgcttctacc
gggacgtcgagttcgtttttgggatttcaaacatcctccaaaagtgtaggcactcctaca
ccagcgtctcaaccgcaatcaacagctgctctgtctttgtttggtgcttctgcttccttg
acaaccacttcaactgttacaaccactaccgctcaaacgtcatctgcgcttgttgtatct
tctagtagtgggacaactacaagtgtcagcacggctgtagcctctgctccaaagctgcca
tctgaaattactggaaaaaccgttgaggagatcatcaaggagtggaatgtggagctccag
gaaagaactagcaagttcaggaagcaagctaatgcaatagctgagtgggacaggagaatc
ttgcagaaccgagatgttcttcttaaacttgaggcagaagttgcgaaagttgttgatact
caatccaaccttgagagacagctggagctgattgagactcatcaacaagaggttgacaag
tctttgcagagtgtggaagaagaagctgagcgaatatacaaagacgagcatggtctactt
cttgatgacgaagcagcttcaaccagagatgcaatgtatgagcaggctgaatttatcgag
agagaaatggaacatatgacggaacaaataaaatcggttattcagactctcaatgccaat
cagggtggagaacttgaagcaactgatggtatgactccaatggatgtcgttgtccggatc
cttaacaatcaactaagttcattaatgtggattgatgaaaaggctgaagaattttcttca
cgtattcaaaaacttgctaaacaaggttctgctgctgatcgggaactgatgggcccaaag
ttttggctgtcccgataa
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