Helianthus annuus (common sunflower): 110864836
Help
Entry
110864836 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110864836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110864836
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110864836
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110864836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
zf-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110864836
NCBI-ProteinID:
XP_021969687
LinkDB
All DBs
Position
6:complement(15900491..15903845)
Genome browser
AA seq
334 aa
AA seq
DB search
MEMDNIECVSTSDGLEDEIPHHHNHNYNHHHHNHQNNPQIPQFSSLKTHNVNVVVPLTIN
RTTSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKTRVHNRCPTCRQELGDIRCLALEK
VAESLEFPCKYSSLGCPGIFPYYNKLKHEALCNFRPYSCPYAGSECSVVGDIPYLVSHLR
DDHKVDMHSGYTFNHRYVKSNPREVENATWMLTVFNCYGQYFCLHFEAFQLSMAPVYMAF
LRFMGDENDARNYRYSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFS
GGDRKELKLRVTGRIWKEPPNSDGSNVCIPNLCS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggataacattgaatgtgtttcaacctctgatgggttagaagatgaaatccca
catcatcataatcataattataatcatcaccatcacaatcatcaaaacaatccccaaatc
ccacagttttcttctttgaaaactcataatgttaatgttgttgttcctttgactattaat
cgcacaaccagtgttcatgagcttcttgaatgccctgtttgtaccaattcaatgtatcct
ccaattcatcagtgtcacaacggacacacgatttgctccacctgtaagacgcgtgtacac
aacaggtgtccaacttgtcgacaagaactcggggatataaggtgcctagcgttggaaaaa
gtggccgaatcactcgagtttccatgcaaatacagctcccttgggtgccccgggatcttc
ccgtactataataagcttaaacatgaggccttatgcaattttaggccgtacagctgtccg
tatgctggatcagagtgctcggttgttggggatatcccgtatctcgtttcccatttgagg
gatgaccataaagtagatatgcactctggatacactttcaaccatcgctatgttaagtcc
aatccacgcgaagttgaaaatgccacatggatgcttacggtcttcaactgctatgggcaa
tatttttgtctccactttgaggcgttccagctcagcatggctccagtctacatggcgttt
ctccggttcatgggtgacgaaaatgacgccaggaattaccgttacagtttggaggttggt
gggaatggcagaaaactcatatgggaaggtacccctagaagcataagagacggtcacaga
aaagttagggacagccatgatgggctcataatacagagaaacatggccctctttttctcg
gggggagataggaaagaactcaagttgcgggtcactggtcggatatggaaagaaccgcct
aactctgatggtagcaatgtatgcattccaaatctgtgtagttaa
DBGET
integrated database retrieval system
