KEGG   Helianthus annuus (common sunflower): 110864976
Entry
110864976         CDS       T05101                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110864976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:han04121]
    110864976
   03036 Chromosome and associated proteins [BR:han03036]
    110864976
Ubiquitin system [BR:han04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110864976
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     110864976
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 MIOS_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR41 ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 110864976
NCBI-ProteinID: XP_021969841
LinkDB
Position
1:complement(32648744..32650037)
AA seq 336 aa
MDSSTLESQTRPDNFVTYESPFTLYSMAISPTTTTTHRRIAVGSFIEEYANRINILTFNE
DTLSIKPNPNLSFDHPYPPTKLMFHPNPTVSADILASSGDFLRLYSLRDTSIEPISLLNN
SKSSEFCAPLTSFDWNELEPRRIGTSSIDTTCTIWDVEKGVVETQLIAHDKEVHDIAWGE
AGVFASVSADGSVRVFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKI
VVLDIRSPTLPVAELERHRGSVNAIAWAPVSCQHICSGGDDSQALIWEVPNVAGPNGIDP
VSMYMAGAEINQVQWSAAMPDWIGIAFGNKMQLLKV
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggacagttcaaccctagaatcccaaacccgacccgacaacttcgtcacatacgaatcc
cccttcaccctctactccatggccatctcccccaccaccaccaccacccaccgccgcatc
gccgtcggcagcttcatcgaagaatacgccaatcgaatcaacatcttaaccttcaacgaa
gacaccctctccatcaaaccaaaccccaacttatccttcgaccacccctacccccctacc
aaactcatgttccatcctaaccccaccgtctccgccgacattctagcctcctccggcgac
ttcctccgcctctactccctccgtgacacctcaatcgaacccatttccctcctcaacaat
agtaaaagcagcgagttctgcgcccccttgacttcattcgactggaatgagctcgagcca
aggcgaattggaacgtcttccatcgataccacttgcacgatatgggacgtggagaaagga
gttgtggagactcagttaatcgcccatgataaggaggttcatgatattgcttggggggag
gctggtgtgtttgcttcggtatccgcagatgggtcggttcgggtctttgatttacgggat
aaggagcattccacgattatatacgaaagtcctcagccggacacgcccttgctgagattg
gcctggaataagcaggatttgaggtatatggcgacgattttgatggatagtaataagatt
gtggttcttgatattcggtcgcctacgctgcctgtcgcagagttggagaggcatagaggg
agtgtgaatgccattgcgtgggctcccgtgagttgccagcatatttgttcgggtggggat
gattcgcaggcgcttatttgggaggtgccgaatgtggctgggccgaatgggattgatccc
gtgtccatgtatatggctggggctgagattaatcaggtgcagtggtcggctgctatgccg
gattggattggtattgcttttgggaacaagatgcagcttctgaaagtttga

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