Helianthus annuus (common sunflower): 110865368
Help
Entry
110865368 CDS
T05101
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110865368
03036 Chromosome and associated proteins [BR:
han03036
]
110865368
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110865368
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110865368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
Tex_central_region
HHH_3
SH2
S1
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
110865368
NCBI-ProteinID:
XP_021970301
LinkDB
All DBs
Position
6:47574420..47585802
Genome browser
AA seq
1574 aa
AA seq
DB search
MAGNTILSDEEDEIEVEEDEREEPDGEDVDPGDRDDDEDEEDEEGQDEYEKDGFIVDDID
EEDQDGEEEDRADSDEERQRKKKRKKRESEKNYVLDEDDYELLQDNVGFRRPKVESKKFK
RLKKARADADEGQSGFSDEEEYDITGKGGRSAEDKIKRSLFDDDEGPPLEDIAEEDQQLE
EEDGDIGEEEDEMADFIVDEEEVDEHGEPTRRRKVNKKKSRQAPGVSSTAIQEAHDIFGD
VDELLRQRKQGLERISRYDESGEWRERRLEDEFEPIILSEKYMTESDDRIREIDIPERMQ
ISEESTGPPPTDGISIDDESNWILNQLGTGMVPLFSKEGHELAVDKGDIVRFLEFMHVHK
LDVPFIAMYRKEECRSLFKDPEPQDDKDDKKNPDEKPTLRWHKLLWAILELDRKWLLLQK
RKSALQVYYNKRFEEERSVYDETRLHLNQKLFDSITKSLKVAESEREIDDVDSKFNLHFP
PGDVGVDEGQFKRPKRKSQYSICSKSGLWEVATKFGYSSEEFGLLISLEEMRTDELEDAK
ETPEEVASRFTCAMFENPQAVLRGARHMAAVEISCEPCVRRHVRSIFMDNAVVSTNPTAD
GNVSIDTHHQFAGIKWLKDKPLTKFDDAQWLLIQKAEEEKLIQVSVKLPTSIHDQLINDA
HNYYLSDGVSKSAQLWNEQRKQIINDAFDGLLLPSMAKEARALLTSRAKNWLLTEYGQNL
WDKVSVAPYQKKDHDVNSSDDYEAAPRVMACCWGPGKPTTTFVMLDSYGEVLDVLYAGSI
SIRGQNANDQQRKKNDQQRLLKFMTDHKPHVAVLGAVNLLCPKLKEDIYEIVFKMVEDHP
RDVGQEMDSLQVVYADETLPHLYENSRISSEQLQPQSGIVRRAVALGRYLQNPLAMAATL
CGPAKEILSWKLTPLESFLTPDEKYSMVEQIMVDATNQVGLDVNLAISHEWLFAPLQFIS
GLGPRKAASLQRSLVRASSIYTRKDLLNHGLGKKVFVNAVGFLRVRRSGNAASSSQFIDL
LDDTRIHPESYGLAQELAKDIYTEDGQGDVNDEDMLEMAIEHVRENPYLLKNLEVDEYAR
SKKRENKKETLNHTRLELIQGFQDWRKPFVEPNADEEFYMLTGETEQTLSEGKIVQATVR
RVQPQRAVCVLDSGLTGLLNKEDYSDDRRDNDLTEKLDEGDILTCKIKSVVKGRCQVFLS
CKESDLRSDRSRNNKAMDPYYYEDRDNLDNEKEKARKAKELAKKHFKSRMIVHPRFQNIT
ADEAMEMLSDKEPGESIIRPSSRGPSYLTLTLKIYDGVYAHKDIIEGGKENKDITSMLRL
GKTLKIGDDVFEDLDEVMDRYVDPLVANLKTMLAYRKFRDGGKAEVDESLRKEKNENPSR
IVYSFGISFEHPGTIILTYIRSSNPHHEYVGLYPKGFKFRKKMFEEIDRLVAYFQRHIDD
PLDAGPSIRSVAAMVPMRSPATGGSGGWGGSNDGGWRGSSGDRERTSTPSSRTGRNDYRN
GGNHDGHPSGLPRPYGGGGGRRPGRGGRGSYNNRDAERGNGRSPGSVGSGGGGSKRSSMQ
SQTGGSSAGWGSGW
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaacaccattttatccgacgaagaagatgagattgaagttgaagaggatgag
cgagaagagcctgatggtgaagatgttgatcctggagatcgagatgatgatgaagatgaa
gaggatgaagaaggacaagatgaatatgagaaggacggttttatagtggatgatatcgat
gaggaggatcaggatggggaggaagaggatagagcggatagtgatgaggagagacaaagg
aagaagaaaaggaagaaacgagaatcggagaagaactacgttcttgatgaagacgactat
gagcttcttcaagataatgttggatttcgacgcccaaaagtcgagagtaaaaagtttaag
cgattaaagaaagcaagggccgatgctgatgaagggcaatctggattttctgacgaggag
gaatatgacataactggaaaaggcgggcgaagcgctgaggataagattaaacgtagttta
tttgatgacgatgagggtccaccgttggaggatattgctgaagaagatcaacagttagaa
gaagaagatggtgacatcggtgaagaagaggacgaaatggctgactttatcgttgacgaa
gaagaggttgatgaacacggagaaccaacaaggagaagaaaggttaacaagaaaaaatcg
aggcaggcccctggggtctcatctaccgcaattcaggaggctcatgacatattcggtgat
gtagatgagctcttaaggcaaagaaaacaagggctcgaaaggattagcaggtatgatgaa
agtggcgaatggcgggaaaggaggctagaagacgaatttgaaccaattattctttctgaa
aagtacatgactgaaagtgatgaccgtattcgggagatagatattcctgaaagaatgcag
atctctgaggaaagcactggtccacccccaacagacggaataagtatagacgacgagagt
aactggattcttaatcaacttggaacgggaatggtaccgttattcagcaaagaagggcat
gagctggcggtagataagggcgatatcgttagatttttggaatttatgcatgttcataag
ttggatgtaccgtttattgctatgtatagaaaggaagagtgccggagtctttttaaagat
cccgagccacaagatgacaaggatgataaaaaaaatcctgatgaaaaacccacgctgagg
tggcacaagttgctttgggctatcttggagttggacagaaagtggttactgcttcaaaaa
cgaaaaagcgcactacaggtgtactacaacaagcggtttgaagaagaaagaagcgtatac
gatgaaacacgtcttcatttgaatcaaaagctgttcgattcaatcacaaagtcactcaaa
gttgctgagtcagaacgagagattgatgatgtggactcaaagtttaacctccactttccg
cctggtgatgtcggtgtggatgaagggcagttcaagagaccgaagaggaaatcacaatat
agcatttgtagtaaatcgggactttgggaggttgctacgaaattcggctatagctctgaa
gaatttggattgttgatctctctcgaagaaatgagaaccgatgaattagaagatgcaaag
gaaacaccagaagaagtggcttcaagatttacatgtgcaatgtttgaaaatcctcaagct
gttctcaggggggctaggcatatggcggcagttgagattagctgtgagccatgtgtccga
aggcatgttcgaagcatttttatggataacgctgtggtgtcgactaatcccaccgctgac
ggcaacgtgtcgatagacacacatcatcagttcgcagggatcaagtggttaaaagacaaa
ccgttaacgaaattcgacgatgcccaatggcttcttatccaaaaagccgaagaagaaaaa
cttatccaagtttccgtaaagcttccgacgtctatccacgatcagttaattaacgatgct
cataattactatcttagtgacggtgtgagtaaatctgctcaattatggaacgaacaaaga
aagcagataataaatgacgctttcgacggtttgcttttaccgtcaatggcgaaagaggcg
agagcgttattaacgagtcgagcgaaaaactggttgcttacggaatacggacagaattta
tgggataaagtatcggtcgcaccgtatcagaaaaaggaccatgatgttaattcatctgac
gactatgaagccgcaccaagagttatggcgtgctgttggggcccggggaagccgacaaca
acgtttgtgatgttggattcgtacggggaagttcttgatgtgttgtatgccggttccata
agcatacgcggtcaaaacgctaatgatcaacagcgtaaaaagaacgaccaacaacgtctt
cttaagttcatgacggatcacaaacctcatgttgctgttcttggagcggttaatttgtta
tgtcctaagctcaaggaggatatttatgagatcgtttttaagatggttgaagatcacccg
agagatgttgggcaagaaatggacagtttacaagttgtatacgctgatgagactctccca
cacttgtatgaaaactcgcgtatatcatcagaacagcttcaaccacaatcgggcatcgtt
aggcgagctgtggcccttggacgttaccttcaaaatccattagcaatggcggctaccctc
tgtgggcccgcgaaggagattttatcgtggaaacttactccattagaaagttttttaact
cccgacgaaaaatacagcatggtcgaacaaattatggtagacgccactaaccaagtgggc
ctagacgtaaatctagccataagccatgaatggttgtttgctccgttacagttcatttcc
gggcttgggccacggaaagcagcttcattacagcgatcattagtacgggctagctcaata
tacacccgtaaagacttgctgaaccacgggcttggcaagaaagtgtttgtaaatgcagtt
gggttcttacgggttcgtcgaagcggaaacgctgctagcagtagtcaattcattgacttg
ctagatgatacgagaatccacccggagtcgtacggtctcgcacaggaattggctaaagat
atttacaccgaagatggtcaaggtgacgttaacgatgaagatatgcttgaaatggcgatc
gagcacgtgagagaaaacccttatttgttaaaaaaccttgaggttgacgagtacgccaga
tcgaaaaaacgcgagaataaaaaagaaacgttaaatcatacacgattggagttgattcaa
ggttttcaagattggcgaaaaccgtttgtggaaccgaatgcggatgaagagttttatatg
cttactggcgagacagaacagacactatccgagggtaaaatcgtccaagcgactgttcgc
agggttcaacctcaaagagcggtatgtgttctcgactcagggttgaccggtctactgaac
aaagaagactatagtgatgaccgtagagacaatgatttgactgagaagttggatgaaggc
gatatcttaacttgtaaaataaagtctgttgtgaaaggcagatgccaggtgtttttaagt
tgtaaagaaagcgatttaagaagtgaccgatctcgcaacaataaagcgatggatccgtat
tattatgaagatcgcgataatttagataatgaaaaagaaaaggcgcgtaaagctaaagag
ttagcgaagaagcattttaaatcgagaatgattgttcaccctcggtttcagaatattaca
gctgatgaagcaatggagatgctgtctgataaggaacctggtgagagtatcattcgtcct
agctctcgtgggccctcctatttgactttgacgctaaaaatctacgatggtgtttacgct
cacaaagatattatcgaaggcggaaaggagaataaggatatcacaagcatgttgcgtctc
ggaaaaacattgaaaataggagatgacgtgtttgaagatctcgatgaggtaatggatcgt
tatgttgatccgttagtagctaacttgaaaacaatgctggcgtaccgcaagtttagagat
ggggggaaagcggaagtggatgaaagtttacgaaaagaaaaaaacgagaacccgtcaaga
attgtttactctttcggtatatcgtttgaacacccgggcacaattattttgacttacatt
aggagttcgaatccgcatcacgagtatgttggattgtatccgaaagggttcaaattccgc
aagaagatgtttgaggagattgacagacttgtggcgtattttcaaagacatattgatgat
ccactagacgctggaccgtcaatacgttcggttgccgccatggtcccgatgcgcagccct
gcaactggtggttctggtggctggggtggtagcaatgatggtggctggcgaggctcgtct
ggagatcgagaaagaacatccaccccaagctctagaactggtaggaatgattataggaat
ggtggcaatcatgacggacatccaagtggtctgccgcggccttatggtgggggtggtggt
cgtcggccgggccgaggtggacgagggtcatataacaaccgagacgctgagcgtggaaat
gggcggtcaccgggaagtgtgggcagtggaggtggcggcagtaagagaagttctatgcag
tcccaaacaggaggaagtagtgctgggtggggcagtggatggtag
DBGET
integrated database retrieval system
