Helianthus annuus (common sunflower): 110865863
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Entry
110865863 CDS
T05101
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110865863
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110865863
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110865863
Membrane trafficking [BR:
han04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110865863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
MBT
DUF6965
Motif
Other DBs
NCBI-GeneID:
110865863
NCBI-ProteinID:
XP_021970882
LinkDB
All DBs
Position
15:55340088..55350128
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AA seq
1003 aa
AA seq
DB search
MDPKPPLRSAKLTGNRQNSSSLLSKTLSDASTQNLSSILNNPHVSDSSWSGWWSSSSTAV
QIPDFAPLSGTKTTSGGVEISRSDFASYLTSVSDQYNRFEDIRNHSNNERSKDSKDDVNY
ASDCYDRVGEALVECLKEVPALYFKEDFALEDGGTFRAACSSVGDNDVLQEKLTQYLDVV
EVHLVKEISLRSNSFFEAQGQLEDLSLKIVEGCGRIRELKEKIRVLDGDLVDSARQIQEL
KVTRGDLLALQEKLRVVLYVNQSLAALKLLVASADCAGALDVTDDLKHFLNGDQLTGLHC
FRHLEDHVAAAINSVNSILSAEFLRVSVNDAGEKDAVILSKAKARIASPGTEEDNDEYWD
QEDTSSFHDRLLPLIIGLLRTAKLPAVLRIYRDTVISDMKTAIKSVVAELLPVLLARPLD
SDFKSGDRIVDSDGGGSSLANKLRNLSSESFVQLLETIFKIVQAHLLRAAEVKKVIEWMM
SNLDGHYAADSVAAAIANGALTAEISSAADGQSGPSSLSTRKNLIKVSPATSSSNLSKNF
RADVLRENAEAVFAACDAAHGRWAKLLGVRALLHPKLRLQDFLNIYNVSQEFVTATEKVQ
LLVMANKYSILTICVYNMDLCLRKQIGGRLGYSIRGTLQSQAKAFVDFQHESRMTKLKAL
LDQETWVEVDVPNEFQAIVDSLFRLESDSEDDNHSKSIANSYNEVVTSSAEQVDLNGQVN
NTKTKNGQAKSSAHLISFRGVGYHMVNCGLILLKMLSEYIDMNNFLPALSSEVIHRVLEM
LKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIMPEIRKVLFLKVPEAR
KGLLLSEIGRVSQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIIETWSRVDETEIQPSQ
FAKSLTKEVGYLQRVLSRTLHEADVQEIFKEVTIIFDIQISDAFAHVDISTPQAKARLNC
EIQHILGCIKSLPSAKLNIESGIPIAGQLEALVKRISSAESDQ
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaacctcctctccgatcagcaaaactcaccggaaatcgccaaaactcatcg
tcgttgttatccaaaacactttcagatgcaagtacacaaaacttatcctccattctcaac
aatccacacgtctccgatagctcgtggtccggctggtggtcgtcgtcgtcaactgccgta
cagattcctgattttgctccactttcaggtaccaaaactacctccggtggtgtagaaata
tcacgatctgatttcgcatcttatttaacgtcggtttcggatcagtataatcgatttgaa
gatattcggaatcattcgaataacgagaggagtaaggacagtaaggatgatgtgaattat
gctagtgattgttatgatagggtaggggaggctctggttgagtgtttgaaagaggtgcct
gcattgtattttaaggaggattttgcgcttgaggatggggggacgtttagggcggcatgt
tcgtcggttggggataatgatgtgttgcaggagaagttgacgcagtatttggatgtggtg
gaggtgcatttggttaaggagatatcgttgcggtcgaattcgtttttcgaggcgcaaggg
cagttggaggatttgagtttgaagattgtggaagggtgtgggaggattcgggagctgaag
gagaagattagggttttggatggggatttggtggattcggcgaggcagattcaggagttg
aaggttacgcggggtgatttattggcgttgcaggagaagcttagggttgtgttgtatgtc
aatcagtctcttgctgctcttaaattgctcgtcgcatctgctgattgtgctggagcttta
gacgtcacagatgatttgaagcattttctgaatggtgatcaactgactggcctacattgt
tttcgtcacctcgaggatcatgtagccgctgcaattaattctgtaaatagcattctttca
gcagagtttttgcgtgtatctgttaatgatgctggagaaaaagatgcggtaatattgtct
aaagcaaaagcaaggatagcctcaccgggaactgaagaagataatgacgaatactgggat
caagaagatacctctagtttccatgatcgacttctacctctaattataggcttacttaga
accgcaaaacttccagctgtgttgagaatatatcgtgatacagttatatccgacatgaaa
actgctattaagtcagttgttgcagagctgcttccagttcttcttgccagacctttggac
tctgattttaaatcaggcgatcgaattgttgattcagatggtggaggctcatcactcgca
aataagttaagaaacctttcttctgagagctttgttcaacttcttgaaactattttcaag
attgtacaggcacacttactacgagctgctgaagttaaaaaagtcatcgagtggatgatg
tcaaatcttgatggtcactatgctgctgactcagttgctgccgcaattgccaatggtgct
ttgactgcagaaatatcttcagcagctgatggtcaatctggcccctcttctctttcgact
cgaaaaaaccttatcaaggtttctcctgccacaagttcatcaaatttgtcaaaaaatttc
agagctgatgtattgagagaaaacgcagaagcagtgtttgctgcttgtgatgcagctcat
ggaagatgggcaaaactgcttggcgttcgtgcgcttctccatccaaagctgaggttacaa
gattttttaaatatatataacgtatcccaagaatttgtaactgcaacagagaaggtacag
ttattagttatggcgaataaatattcaattttaactatctgtgtgtataatatggattta
tgcttacgtaagcagattggtggaaggttgggatatagcattcgtggaacattacagtct
caagccaaagcttttgttgatttccagcatgaatcgcggatgacaaaactgaaagcgcta
cttgatcaagaaacatgggttgaagtcgacgttcctaatgaattccaggcgatagtggat
tcactttttagattggagtctgactctgaagatgataaccattctaagagcattgctaat
agctacaatgaagtggttaccagcagtgcagaacaggtagatctcaatggacaggttaac
aacactaaaacaaagaatggacaggcaaaatcttctgctcatttaatttctttcagaggt
gttgggtaccacatggtaaactgtggcttaatcttgctgaagatgttatccgagtacatc
gatatgaataattttttgccagcactttcttctgaggttattcaccgtgtacttgaaatg
ttgaaatttttcaacacaaggacgtgtcaacttgttcttggtgccggtgccatgcaggtc
tctggtttaaagtcgattacatccaaacatttggcactagcaagtcaggttatcagtttc
gtgcatgctattatgcccgaaattaggaaggttcttttcctgaaagttcctgaggcgcgt
aaaggattgctgttatcagaaatcggacgagtgtcacaggattataaagtgcatcgcgat
gaaatacatacaaagctggtgcaaataatgagggaaagattgttagttcatctccgtgga
ttgccacaaataattgaaacatggagccgagtagacgaaactgaaatacaacccagtcag
tttgctaaatcactcacaaaggaagttgggtatcttcaacgcgtgctttctcggaccttg
catgaggcagatgttcaagaaatattcaaggaagtgaccatcatctttgacatacaaatc
tctgatgcattcgcacatgtggatattagcactccacaagcaaaagccaggcttaattgt
gaaattcagcacattcttggatgcattaaatcactgccttctgccaagttaaatatcgag
tctgggattcccattgcaggacaacttgaggccttagtcaaaagaatatcttctgctgaa
tcagatcaatag
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