Helianthus annuus (common sunflower): 110866895
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Entry
110866895 CDS
T05101
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110866895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110866895
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110866895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110866895
NCBI-ProteinID:
XP_021971731
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Position
1:59562807..59568090
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AA seq
304 aa
AA seq
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MVESTNGAADLSSEMEVDAFRRLFPLRFHERHLLESVRPDARPLGKARETSLALGAVASA
DGSALAKIGCTTMLAAIKMEVMTPAKETPDEGCIAIDFHMPAICSPIVRPGRPAEAAPVV
SKQLSDTIISSGMVDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLAAVAAFSHLQI
PVVSLNEEGRIVVFSKQNEGEKLKNKPVNEEKRKLKLRSIPFGLTCIIHKNYILADPIAE
EESIMETLITIVLDSSYQLVSLYKPGGPAVAYESIIQDCIALSRQRVGELQTILNEAICD
MEVD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggtggaatctacaaacggtgcggctgatttgtcttcagagatggaggtagatgctttc
agaagactgttccccttgcgatttcacgaacgtcatttgttggagtccgtacgtcccgat
gccagaccacttggtaaagctagagaaacttcattggctctaggggcagtggcatctgca
gatggatcagcactagcaaagataggctgcactacgatgttagctgccattaaaatggaa
gtcatgacgcccgcaaaggaaacaccagatgaaggctgcatagccatagatttccacatg
cctgcaatttgttctcctattgttaggcccggcaggcctgctgaggctgcacccgttgtc
tctaagcagctatccgataccatcataagttccgggatggttgatctcaaagagttgtcg
ttggtcagtggcaaagctgcttggatggcatatctggatatatattgtttggatgctgat
ggtgcgcttttcgatgctgccttacttgccgctgttgccgctttctcccatttgcaaatt
cctgtggtgtcgttgaacgaagaaggaagaatcgttgttttttcaaaacaaaacgaggga
gagaaattgaagaacaaaccagtaaacgaggagaaaagaaagcttaaattaaggagtatt
ccgttcgggttaacttgtataattcacaagaattatattctagctgatccaatagctgag
gaagaatccatcatggaaacactaataaccattgtattggattcttcgtatcaattggtc
tctctttacaaaccaggtggtcctgctgttgcctatgagtccataatccaggattgtatt
gcattgtcaagacaaagagtaggagagcttcagacaatcctgaatgaagccatttgtgat
atggaagttgattag
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