Helianthus annuus (common sunflower): 110867745
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Entry
110867745 CDS
T05101
Name
(RefSeq) rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110867745
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110867745
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
110867745
NCBI-ProteinID:
XP_021972442
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All DBs
Position
7:54360636..54393516
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AA seq
669 aa
AA seq
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MYPLIVFVCALSLLILSSDTLYATRAQRSSMASIGVNLTFTDNHVVVSNGFVRMIFSNPE
GHITSIQYNGMENLLEVINDESSRGYWDLVWSPPGTPGTTGTFERIVGTSCQVIVETEEQ
VELSFSTTWNSSLEGKHVPLKIDKRFVLLRGSSGFYSYAIYEHLEGWPGFNLAETRIVFK
LRNDKFHYMAMSDYRRRYMPSPNDRSPNRGKPLAYPEAVLLVNPVEPEFKGEVDDKYQYS
CETEDLKIHGWISTDPPVGFWQITPSNEFRTGGPTKQDLTSHVGPTNLAMFVSTHYAGSD
LVIKFKNREKWKKVFGPVFMYLSSTGEEPLTLWNDAKNQMLEEVGKWPYSFPASSDFHKA
HERGRISGRLFVYDRFITDEKTPATSASIGLAPPGDPGSWQRENKGYQFWTKTDVEGRFS
IKNVVAGTYNVYAWVHGFIGDFKNDSTITITQGCDIDVGDLVFEPPRDGPTLWEIGVPDR
SAAEFYIPDSDRMYTNMFLANDHNRFRQYGLWERYAKLYPDGDLVFTIGQSDYKKDWFFA
HVNRKRYDIMYEKTTWTIKFKLHDVNKNGTYKLRLALASAQLSDLQVRANDPNTDSPLFS
TGTIGGDNAVARHGIHGLYWLFNVDIPGKFLNLDGENAIYLTKINEGIIFPGGIMYDYIR
LEGPPPCCS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgctcattgtttttgtgtgcgctttgagcttgctcatactttcatcagatacg
ttatacgcaacaagagctcaaagatcgtcaatggcttccattggagtgaacctaactttt
acagacaatcatgtagtagtgagtaatggctttgtacggatgattttttcgaatcccgaa
ggtcatataacaagcatacaatacaacggaatggaaaacctgctggaagtaatcaatgat
gaatcaagtcgagggtattgggaccttgtttggagtccacccggaactcctggaacaact
gggacttttgaaaggatcgttggaacaagctgccaggttatagttgaaaccgaagaacaa
gtggaactttcattctcgacaacatggaattcttcgctagaaggaaagcacgtcccgttg
aagatagacaaaaggtttgtgttgcttcgtggttcttcgggtttctactcgtatgcaatt
tatgaacatttggagggatggcctggtttcaatcttgctgaaaccaggatagtgtttaag
cttaggaatgacaagtttcactatatggcgatgtccgactacaggcgaaggtatatgcct
tcgcctaatgatcggtcacctaatagaggtaaaccattggcttatcctgaagcagtactt
ctcgttaatccggtggaacccgagttcaaaggagaggtagacgataaatatcaatattcg
tgtgaaacagaggacttaaagatccatggatggatatccaccgatccaccggttggattt
tggcaaattacaccaagtaatgagtttcgaacaggcgggcccacgaaacaagaccttact
tcccatgtcggaccgacaaatctagctatgtttgttagcacacattatgcgggaagcgat
ttagttatcaagtttaaaaacagagagaaatggaagaaagttttcggcccggtttttatg
tatctaagttcgacaggagaagaacctcttacactttggaatgatgccaaaaatcagatg
ctagaagaagttggaaaatggccttacagctttccagcctcgagcgatttccataaagct
cacgaacggggtaggataagtggtagattattcgtgtatgataggttcattacagatgaa
aaaactcctgcaaccagtgcatctatcggactagctccgccaggagacccgggatcatgg
caacgcgaaaacaagggctatcagttttggactaaaacagatgttgaaggtaggttttca
atcaaaaacgtggtggctggcacatataatgtatatgcatgggtccatggattcattggt
gacttcaaaaacgatagcaccatcaccatcacacaaggttgtgacatcgacgttggggat
cttgtttttgagcccccgagagatggtccaacgttatgggagatcggggtacctgatcgc
tcggcagctgaattttacattcctgattcggacaggatgtatactaacatgtttctagcc
aacgatcataacaggtttagacaatacgggttgtgggagagatatgcaaagctatatcct
gatggtgatttggtattcacgattggtcaaagtgactacaaaaaagactggttcttcgca
catgtaaacaggaagagatatgacattatgtacgaaaaaacgacatggactatcaagttc
aagttacatgacgtgaacaagaatggaacttataaactgagattggctctagcatcagca
cagctatcagaccttcaggttcgagctaatgatccaaacactgattcaccactattttcg
acgggaacaattgggggtgacaacgcagttgcacgacatggaatacatggactgtactgg
ttattcaacgtggatatacctggaaagtttttaaacttggacggagaaaacgcgatttat
ttgacaaaaataaatgaaggaattatatttcctggaggaataatgtatgactacattcgt
ttagaaggaccacctccttgttgttcttga
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