Helianthus annuus (common sunflower): 110867846
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Entry
110867846 CDS
T05101
Name
(RefSeq) pre-rRNA-processing protein TSR2 homolog isoform X1
KO
K14800
pre-rRNA-processing protein TSR2
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110867846
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110867846
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
WGG
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf_PCFS4
zf_RING_Vps8
zf-RING-like
zf_RING_Vps8_fungal
RINGv
zf-RING_16
UAE_UbL
SLX1_C
zinc_ribbon_16
zf-RING_Vps41
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
110867846
NCBI-ProteinID:
XP_021972588
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Position
7:complement(19099562..19102094)
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AA seq
201 aa
AA seq
DB search
MAELTPEAVNLLSEGIALLLGRWYALQNEPEKAQQLTVNIYQWLIRPSEALYVDELEDLL
DDFMLSFNTDIDDGSVEEIADSLMIMHKECLEGNFASIVRLRQPVPTFNQRIQEQGGQFG
NKDLGLSDDFISDHGKVIIFISSKSSPADEEPNFCVICQMDFEDQERIRVLDCHHEYHVE
CISKWFNVKRTCPICKSIALY
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcacacccgaggctgttaatctgctcagtgaaggtatcgccttgcttctt
ggtagatggtatgcacttcagaacgaacctgagaaagcccaacaacttaccgttaatatc
tatcaatggctaatcagaccttctgaggcattatatgttgacgagttggaggatttactt
gatgatttcatgctctcttttaatacggatattgatgatggtagcgttgaggagatagca
gatagcttaatgatcatgcataaagaatgtttggaaggtaactttgcctcgattgtacga
ctcaggcaacctgttcctactttcaatcaacgcatacaggagcaaggtggacagtttggc
aacaaggatttaggtttgtcggatgattttatttcagatcatggaaaagtaataatcttc
atctcatccaaatcttcacctgctgatgaagaacctaatttctgtgtaatttgtcagatg
gattttgaagatcaagaaagaatcagggtgctagattgtcaccacgagtaccatgtagaa
tgcatcagtaagtggttcaatgtgaagaggacttgcccgatttgcaaatccatagcactt
tactaa
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