Helianthus annuus (common sunflower): 110868016
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Entry
110868016 CDS
T05101
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110868016
04120 Ubiquitin mediated proteolysis
110868016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110868016
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110868016
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110868016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-RING_11
zf-C3HC4_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110868016
NCBI-ProteinID:
XP_021972786
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All DBs
Position
7:25312140..25315862
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AA seq
506 aa
AA seq
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MMRLQTYAGLSVIATLAVIYHAFSSRGQFYPATVYLSTSKVCLVLLLNMGLVIMCIMWQL
TKLVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLVKSLHWLA
QKRVEYIETTPTVSKLSHVRIVSFMGFLLLVDCLFLYNSVKHLIQTRQASVSLFFSFEYM
ILATTTISTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFVNYG
VPLHLIRELYETFRNFKLRIADYIRYRNITSNMNDRFPDATPEELNASDATCIICREEMT
TAKRLVCGHLFHVHCLRSWLERQHTCPTCRALVIPNEGGTVTTRSRAGAHRQGANSENAS
SQDQNGDAPGDGNISRHQKRVQAAAAAAAIYQKSFVYPSPTALTWSSGYAVLPNKSTPGV
SVNNGEHDNSVLNNHANFPSFQFPQTGFIPIQQQIEKSATEKKLVGESSSSGSREDLPIS
TDGKGKAVVSSSSLSDSGVDQSQNGP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctacagacatacgcgggacttagtgtgatcgccacacttgctgttatctat
cacgcctttagtagtagagggcagttctacccagcaacagtttacttatctacctccaaa
gtctgtttagtgctgcttctcaacatgggtttggtgatcatgtgcatcatgtggcagctc
acaaagctagtatttctcggctctcttagagaagcagaggtcgagagactgaacgagcaa
tcatggcgagaagttatggaaattctttttgccataactatattccggcaggatttttct
gttacgtttcttgccatggttaccgctcttttactcgtcaaatctttgcattggttggct
caaaagagagttgagtacattgaaacgactccaactgtatcgaagctgtctcatgttcgg
attgtttctttcatgggattccttctccttgttgactgtctttttttgtataactcggta
aagcacttgatacaaacgcgccaagcttccgtttctcttttcttttcattcgagtacatg
atattggctacgacaacaatctcaacttttgtcaaatacgttttctatgtgagtgacatg
cttatggaaggacaatgggaaagaaaagcagtgtacacattctatttggagctgattcgt
gacttgctgcacttatctatgtatctgtgctttttcctagtaatctttgtgaactatggt
gtgcctctgcacttgattcgggaactgtatgagacatttagaaacttcaagttgcgaatt
gctgattacatccgttaccggaatatcacatcaaatatgaatgaccggtttcccgatgca
acacctgaagagttgaacgcaagtgacgcaacctgcattatctgtagagaggaaatgacg
actgcgaaaagattagtctgcgggcatcttttccatgtgcactgcctcagatcatggtta
gagagacaacatacatgtcctacttgcagggcacttgttataccaaatgaaggtgggacc
gtcacaacacgctcccgagctggagctcatcgtcaaggagcaaattcggaaaacgcatct
tctcaagatcaaaacggtgacgctccaggagacgggaatattagcagacatcaaaagaga
gtccaagctgccgctgcagcagctgctatatatcagaaatcttttgtttacccttctcca
actgcgctaacgtggtcttctggatatgctgtgcttcccaacaaatctacgcctggagtc
agcgttaataatggcgaacatgacaattcggttctgaacaatcatgcaaactttccgtct
ttccagttcccacaaactggtttcataccaatccagcagcagattgagaaatcggcgaca
gagaaaaagttggttggagaaagtagcagcagcggcagtagggaggatctgcctattagt
actgatggaaaagggaaggcggtggtttcatcatcatctttgtcggattcaggcgttgac
caaagtcaaaatgggccataa
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