Helianthus annuus (common sunflower): 110868259
Help
Entry
110868259 CDS
T05101
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110868259
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
han01002
]
110868259
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110868259
Enzymes [BR:
han01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110868259
Peptidases and inhibitors [BR:
han01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110868259
Ubiquitin system [BR:
han04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110868259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
110868259
NCBI-ProteinID:
XP_021973074
LinkDB
All DBs
Position
7:115924672..115938800
Genome browser
AA seq
1149 aa
AA seq
DB search
MTLMTPPPIDAEEDEMLVPHSDFVAPEGPQPMEATPAEAPNVVDAPTVDDPPSARFTWTI
ENFSRLNSKKLYSDVFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSSTLPYGWSRYAQFS
LAVVNQIHNKFTVRKDTQHQFNSRESDWGFTSFMPLSELYDPSKGYLLNDTCIVEADVTV
RKVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
EDGKYLSPQADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDM
KRALDEQYGGEEEVTLLIACYGLYKSFYTILYQLIMNLYFFSCVLQLPQANPGFNNSPFK
FTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRLKKEQEEKEQKRKEKAEAHLYTI
IKVARDEDLHEQIGKDIYFDLVDHDKVRSFRIQKQTPFALFKEDVAKELGIPVQYQRFWL
WAKRQNHTYRPNRPLTPQEEAQSVGHLKEVSNKANNAELKLFLEVEVGQDLRPIAPPEKT
KDEILLFFKLYDPLKEELRFVGRLFVKATGKPIEILAKLNELAGFTPDEEIELFEEIKFE
PNVMCEHVDKKLTFRGSQLEDGDIICFQKPLKVENAETCRYPDVPSFLEYVHNRQVVRFR
CLEKPKEDEFSLELSKLNNYDDVVERLARHLNLDDPSKIRLTSHNCYSQQPKPQPIKYRG
VEHLSDMLAHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQST
VGDVINDLKTKVELSNPNAELRLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEVPEEE
KDLGPQDRLIHVYHFTKDTTQNQQVQNFGEPFFLVIREGETLAEVKVRIQKKLQVPDEEF
SKWKFAFLSLGRPTYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNTPKRSYAANQNRHT
FEKPVRIYN
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctcccatcgatgctgaggaggatgagatgctagttccacat
tcagatttcgttgctccggaaggtcctcaaccgatggaagctacaccagctgaagctccc
aatgtcgttgatgcgccgactgttgacgatccgccgtcggcgcggtttacgtggactata
gagaatttttctaggttgaattcaaagaagttgtactcggacgtgttctttgttggagga
tataaatggcgtgttcttatatttcctaaaggaaacaatgtcgaccatctgtcaatgtac
cttgatgttgcggattcatcgacgctgccatatggttggagtagatatgctcagtttagc
ttagctgtggttaatcaaattcataacaagttcactgttagaaaagatacccaacatcag
tttaattcacgagagagcgattggggtttcacttcatttatgcctctaagcgaactttat
gatcccagcaaaggctatcttctgaatgacacatgcatagttgaagctgacgtgactgtc
cggaaggttgttgactactggtcacatgattcaaagaaggagactggttacgttggcctt
aaaaaccaaggtgctacttgctacatgaactccctgctacagacattataccatatacct
tatttcaggaaggctgtgtatcacatgccaacaacggaaaatgatatgccatcagggagc
attcctcttgctttacagagtttattttataagcttcagtatagtgacacaagtgtcgcc
acaaaagagttgaccaagtcttttggctgggatacatatgattcttttatgcaacatgat
gttcaagaactaaatcgagttttatgtgagaaacttgaagacaaaatgaagggaacagtt
gtggagggtacgattcagcagttatttgaaggacaccatatgaattatattgaatgtata
aatgttgactacaaatcaacaagaaaggagtctttttatgatcttcagcttgatgtcaaa
ggttgccgagatgtgtatgcctcatttgacaagtatgttgaagtagaaaggcttgaaggt
gacaacaaatatcatgctgaacaacatgggttacaggatgcaaagaagggagtactgttc
atcgatttcccacctgttcttcaactccagttaaaacgtttcgaatatgatttcatgcga
gacactatggtgaagataaatgatcggtatgaattcccgttgcaactggatctagataga
gaagatgggaaatatttatcaccacaagcagatagaagtgtacgcaacctttacactctt
cacagtgtgttggttcacagcggtggggtacatggcggacattattatgcttatatacgg
ccaacgctttctgatcaatggtttaagtttgatgatgaacgtgttaccaaagaagacatg
aagagggcattggatgaacaatatggtggagaagaggaggtgactttgctgatagcttgt
tatggtttatataaaagtttctatactattttatatcaactgattatgaatctatatttc
ttctcttgtgtgttacagttacctcaagcaaaccctggtttcaataactctccttttaaa
tttacaaagtactctaatgcatatatgcttgtgtatatacgtgaaagtgacaaggagaaa
ataatatgtaatgtggacgagaaggatatagcagagcacttaagaataaggttgaaaaaa
gaacaagaagaaaaggagcaaaaaagaaaggagaaagcagaggctcatttatatactatt
ataaaggttgcgagagatgaggaccttcatgaacagataggaaaagatatttattttgat
ctagtggatcatgacaaagttcgtagcttccgtatccaaaaacaaacaccctttgctctt
tttaaggaagatgtagctaaagaattgggtataccagtgcaatatcaacgtttctggcta
tgggcaaagcgccaaaatcacacttaccggcccaatcgtccgttgacacctcaagaagaa
gcccagtctgttggacatttgaaagaggtatcaaacaaggctaacaatgctgagctcaag
ttgtttctggaagtagaagttggacaggatctacgccctattgctccacctgagaagact
aaagatgagattctacttttcttcaaactttatgatcctttgaaggaagaacttcggttt
gttgggcggctctttgtgaaggctactggaaagccgatagaaatactggcaaagctaaat
gaactggctggcttcacacctgatgaagaaattgaactattcgaggaaattaagtttgag
cccaatgttatgtgtgaacatgttgacaagaaactaacttttaggggtagccagcttgaa
gatggggacatcatttgctttcagaaacctcttaaagttgaaaatgcagaaacatgtcgt
tatcctgatgttccctcttttctggagtatgttcacaatcgtcaggttgtacggtttcgt
tgtctggagaagcctaaggaggatgagttttctctggaactgtcaaagctcaacaattac
gatgacgttgtggaacgactcgctcgccatttaaacttagacgatccatctaaaatcagg
cttacatctcacaactgttactctcaacaacccaaacctcagccaatcaagtatcgtgga
gtcgaacatctatccgacatgctggctcactacaatcagacttctgatattttgtattat
gaagtattggatattcctctgccagaactacaaggcctgaaaactctgaaagttgccttt
catcatgctactaaagatgaagtggtcatacatactattagattgccaaagcaaagcaca
gtaggggatgtcatcaatgaccttaagaccaaggttgagttgtctaatccaaatgcagaa
cttcgcctacttgaggttttctaccacaaaatttacaagatattccccctgaatgaaaaa
atcgagaatatcaatgatcaatactggacgttacgcgctgaggaggttccagaagaagaa
aaggatctgggtcctcaggaccgtctaattcacgtttaccattttacaaaagacacaact
cagaaccagcaggtccagaacttcggggaaccattcttcctggtaatccgtgaaggtgag
acattagccgaagttaaagtaaggatacagaagaagttacaggttccagatgaggagttt
tccaagtggaagtttgcattcctgtctttgggacgtcccacgtaccttcaggactcggat
attgtctctagtcgatttcagagaagagatgtttatggtgcttgggaacaatatttggga
ttggagcactctgacaatacacccaagaggtcttatgctgcaaatcagaaccgtcacaca
tttgaaaaaccggttagaatctacaactaa
DBGET
integrated database retrieval system
