Helianthus annuus (common sunflower): 110868566
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Entry
110868566 CDS
T05101
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110868566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110868566
03036 Chromosome and associated proteins [BR:
han03036
]
110868566
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110868566
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
110868566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR41
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
110868566
NCBI-ProteinID:
XP_021973454
LinkDB
All DBs
Position
7:131530862..131532225
Genome browser
AA seq
368 aa
AA seq
DB search
MGANSDHNHDNSDEQQRRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
VQLDDSTGEIRPDPSLSFEHPYPPTKVIFIPDKECQKPDLLATSSDFLRIWRIIDDDETP
ADVDIIHNSGSVNNNSSGSRRVEMKSVLNNNRNSEFCGPVTSFDWNEAEPRRIGTSSIDT
TCTIWDIEREMVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYES
SEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPH
SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFA
SKLQILRV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaacagcgatcacaaccacgacaactccgacgagcaacaacgccgctccgag
atctacacctacgaagccccatggcacatctacgccatgaactggagcgtccgccgcgac
aaaaagtaccgtctcgccatcgctagcctcctcgaacaataccctaaccgggtcgaaatc
gtccaactcgacgactccaccggtgagatccgacccgacccctccctctccttcgaacac
ccatacccacccaccaaagtcatctttatacccgacaaagaatgccagaaacccgatctc
cttgccacctcatccgatttcctccgcatttggcgaattattgatgatgacgaaacccct
gctgacgtggatattattcataattcaggttctgttaataataacagttctggctctcgt
agggtggagatgaagagtgtgctgaataataatcgaaacagtgagttttgcgggccggtt
acgtcgttcgactggaacgaagcggaaccgaggcgaatcgggacgtcaagtatcgacacg
acatgtacgatttgggatatcgaaagggaaatggtggatacacagctcattgctcatgat
aaggaggtttacgatatcgcgtggggcggtgtgggtgtgttcgcatcggtttcggctgat
gggtcggtgagagtgttcgatttacgggataaggagcattcgacgattatttacgagagt
tctgagccggatacgccgttggttcggcttgggtggaataagcaggatccgaggtatatg
gcgacgattataatggatagtgcgaaggtggttgtgttggatattcggtttccaacgttg
ccggttgtggagctgcagaggcatcaggcgagtgtgaatgcgattgcgtgggcgccgcat
agttcgtgtcatatttgtaccgcgggggatgattcgcaggcgcttatttgggatttgagt
tccatggggcagccggttgaaggggggttggatccgattttggcgtatactgcaggtgct
gagattgaacagttgcagtggtcgtcttcgcaaccggattgggttgctattgcttttgcg
tcgaagctgcagattctgagggtatga
DBGET
integrated database retrieval system
