Helianthus annuus (common sunflower): 110868657
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Entry
110868657 CDS
T05101
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110868657
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110868657
03041 Spliceosome [BR:
han03041
]
110868657
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110868657
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110868657
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110868657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
zf-CCCH
RRM_3
Motif
Other DBs
NCBI-GeneID:
110868657
NCBI-ProteinID:
XP_021973579
LinkDB
All DBs
Position
7:132734389..132741297
Genome browser
AA seq
769 aa
AA seq
DB search
MELEASTQEPANSPSISESNPDEKEISDDDDDDRNHKHRRRDDARSQSQEREAVEQVYTK
PYRRGNKPFENGHTYRESGSQSNHMDFKFDKRRPSDLNSRIRGRGRGRDPGIWNQRDIAS
QMGPGLFGGRGLSTVSNAYGTSWGAFGLVPGLPNGGMDPLHPLGLQGAYRSINPSMNMGL
GLKRQRCRDFEEQGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLQNANIPGAPGGS
VNSVKPSHGKTNIRGAGPNAGLKDTYIDPAGGVGADFYDPDQPLWGNDSQSSPALQPINQ
SKGSSVDHRVGPLDVSDEHVAKSGGTAIGRVNSIKKKTELRENMVSKANSSTEKRNDANS
SLKTQTGSGKNVPKHSQKAQCTLFVNGIPLQQNKRETLLSHFHKFGEVIDIHIPSNGERA
FVQFSRREEAEAALMAPDAVMGNRFIKLFWANRDNIPVNGTISGYTVPPVVPRGMPVSSA
SRSETIAHGSDHPKSVINAPKPPPPSQKKLENLEVLKEELRKKQEMLDQKRNDFRRKLAK
LEKQTTTLKGEIEPEQVAKKPKLGIVADSAKTETVLSSAGAESIGNGNKSSESSGPQRSK
TTATVAQQESLVLKPSLRPLPPVGPSVVINRFKLDNRPTAFKITSTLPNDLANVAVLKEH
FSQFGDLSKVEIDDPEPANSNNDPGTGKYSARVYFRTRHSAEKAFSSGKCWNGHDLQFSW
FKSSNPGIDSESRLSATKGNVDASVGSENIEQKDINKEQVGPGESNNAS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgaagcttcaactcaagaaccggctaattcaccttccatatccgaaagcaat
cccgacgagaaagaaatcagtgacgatgacgacgacgatcgcaaccataaacaccgtaga
cgagacgatgcaagatctcaatcacaagagagagaagctgttgaacaagtatatactaaa
ccatatagaagaggaaacaaaccatttgaaaacgggcatacttacagagaatcaggctct
cagtccaatcatatggatttcaagttcgataaacgaagaccgtcggatttaaactcgaga
attaggggtagaggtagaggtagggaccccggtatttggaatcaacgcgatattgcgtct
cagatgggtcccggtttgttcggtgggcggggtttatcgactgtttcgaatgcgtacggt
acatcgtggggtgcgttcgggttggttccagggttaccgaatggtggtatggatccacta
catcctctcggtttacaaggagcgtatagatctattaatccttctatgaacatgggtttg
ggacttaaacgtcaaaggtgtagagattttgaggaacaagggttttgtttaagaggtgac
atgtgtccaatggagcatggtgttaaccgtattgttgttgaagatgttcagagcctttct
cagtttaatctaccggtatcacttcaaaatgcaaatattcccggagctccaggtggatca
gtaaattcagttaaaccatcacatggaaaaacaaacatacgtggagcgggtcccaacgcg
ggcttaaaggatacatatattgatcctgctggcggtgttggagctgacttttacgatccc
gatcagcctctatgggggaacgattctcaatcatcacctgcattacagccgataaatcaa
tctaagggatcatctgttgatcatcgtgtgggcccgcttgatgtctccgatgaacatgtg
gccaagagtggcggaaccgctattggaagagttaacagtataaaaaagaaaacagaattg
agagaaaatatggtttctaaagcaaattcttcgactgaaaaacgcaacgatgcaaattcg
tctctgaaaacgcaaactggaagtggaaaaaatgttccgaagcattctcaaaaggcacaa
tgcacgttgtttgtgaacggtattccactccaacagaacaaacgagaaaccctactttca
cattttcataaattcggtgaagttatcgatattcacattccttcaaacggtgaacgagct
ttcgttcagttttctagacgagaagaagcagaagcggctctcatggcacctgatgctgta
atgggtaatcgttttattaaattattttgggccaaccgtgataacattccagttaatgga
acaatcagtggctacactgtgccacctgtcgttccacgtggcatgccggtttcatcagca
tcacgtagtgagacaattgcccatggttctgatcacccgaagtccgttatcaacgccccg
aaaccacctccaccgtcacaaaagaagcttgagaatttagaggttttgaaggaggagctt
cgcaaaaagcaagaaatgcttgatcagaagagaaatgactttcgccgcaagttagccaaa
cttgaaaaacaaactaccactctaaaaggcgagatagaacctgaacaggtggcgaaaaaa
ccgaaactaggaattgtagctgattctgcaaaaactgaaactgttttatcttcagcggga
gctgaatcgataggtaacgggaacaaatcttcggaatcttctgggccacaaagatcgaaa
acaacggccacagttgcacaacaggaatcgctagtgttgaaaccgtcactacgtccattg
ccgcctgttggtccatcagttgtgatcaatcgattcaaactggacaaccgtcccaccgcg
tttaagatcacttcaactctgccaaatgatcttgccaatgttgcagttttaaaggaacac
ttttcacaattcggggatctttctaaggtggaaatagatgatccggagcctgcaaatagc
aataacgatcctggaaccggcaaatattcagctcgcgtatatttcagaacccgacattca
gctgaaaaagcgttttcaagtggtaaatgctggaacggtcacgacttacagttttcatgg
tttaaatctagtaaccctggtatagatagtgaaagtcgtttatccgccacaaaaggaaat
gtagatgcttctgttgggtctgaaaatattgaacaaaaggacatcaacaaagaacaagtg
ggacccggtgaaagtaataacgcgagctaa
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