Helianthus annuus (common sunflower): 110869714
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Entry
110869714 CDS
T05101
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110869714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110869714
03009 Ribosome biogenesis [BR:
han03009
]
110869714
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110869714
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110869714
Complex B
110869714
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110869714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
110869714
NCBI-ProteinID:
XP_021974638
LinkDB
All DBs
Position
1:76993409..77001995
Genome browser
AA seq
547 aa
AA seq
DB search
MSSSYVPPHLRNSTTKTTSTTLDTTTTNHHKLTSKSATNAFSNAAPPRRTSSNNLLQPPR
DVFPPWKPSERVLRLKPEQIEEVRLRLNVDVAVTSDSPPAPAPIESFTDMCLDSSIMKDI
AIHEYTTPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCIAQPSVRRGDGPL
ALVLAPTRELAQQIEKEVKAFSQSLVNFRTAIVVGGTNISEQRSELRAGVEIVVATPGRF
IDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREVMHNLPEKHQTLLFSATMPVEIEA
LAQEYLTNPVQVKVGKVSSPTENVSQTLEKITENEKIDQLLSLLVEEAALAENLGHRFPL
TIVFVERKTRCDEVAEALVAQGLNAVALHGGRTQSEREGALRDFRHGPTNILVATDVASR
GLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGRATSFYTDRDMFLVSQIRKAIADV
QSGNTVAFATGKVARRKEREAAAAQKEARIAQSKLPPTSINVEDKYKYMIAPAMIKKEGS
ADDAWDD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttacgtacctccacacctccgtaactccaccaccaaaaccacctcaaca
accctagacaccaccaccacaaaccaccacaagctcacctctaaatccgccaccaatgcc
ttctccaatgcagctcctcctcgccggacctcctccaataacctcctccaaccgccgcgt
gacgtgtttccgccgtggaagccttccgaacgcgttcttcgtcttaaaccggagcagata
gaagaggtcagattacgtctcaatgttgatgttgctgtcacttctgactctcctcccgca
cctgcaccaatcgaatcgtttacagacatgtgcttggactcgagcattatgaaggatatt
gcaattcatgaatacacgacacctacttctattcaggcacaggcgatgcctgttgcttta
agcggaagggatcttttaggctgtgcagaaacaggcagtggcaaaactgctgctttcaca
atacccatgatacagcattgtatagctcagccttctgttcgacgtggagatggtccgttg
gcactagtgctggctcccactagagagcttgcacaacagattgagaaagaggtgaaggct
ttcagtcagtcgttggtgaatttcagaactgcaatcgttgttggtggaacaaacatttct
gagcagaggtctgagcttcgggctggagttgaaattgtggttgctactcctggaagattt
atcgatcatttacaacaaggaaacacgtctctttcacggatttcatatgttgttctggat
gaagcagatagaatgcttgatatgggttttgaacctcaaataagagaggtaatgcataat
cttccagaaaagcatcaaacactgttgttcagtgctactatgccagtggagattgaagca
ctagcacaggaatatttgacaaatccagtacaagtgaaggttggaaaggttagcagccct
acagagaacgtatcccaaaccttggagaaaattaccgaaaacgaaaagattgatcaactg
ctatcattacttgttgaggaggctgcactagctgaaaacttaggtcaccgttttccctta
acaattgtatttgtggaacgaaagacaaggtgtgatgaagttgctgaagctttggtggct
caaggtctaaatgcggttgctctccatggaggtcgaactcaaagtgaaagagaaggtgcc
ctgcgtgattttagacacggtcccactaatatcttggttgctactgatgttgcatctcgg
ggcctagatgttacaggagttgctcatgtagttaacctggaccttccaaagacaatggag
gactatgtgcatcgaattggaaggacaggtcgcgcaggatcaacaggccgagctacttca
ttttatacggatcgtgatatgttccttgtatcacaaataaggaaagcaatagcagatgtt
caatctgggaatactgtggctttcgccaccggcaaggttgctagaaggaaggagagggaa
gcggcagctgcacagaaagaagcaaggattgcacaatcaaagcttccaccgacgtcaata
aatgttgaggataagtacaagtacatgattgcccctgcaatgatcaaaaaagagggttct
gctgatgatgcttgggatgattaa
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