Helianthus annuus (common sunflower): 110869977
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Entry
110869977 CDS
T05101
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110869977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110869977
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110869977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
110869977
NCBI-ProteinID:
XP_021974866
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All DBs
Position
1:76318305..76321111
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AA seq
409 aa
AA seq
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MRKRKGRQSETLIHSNGEQEDDEFRDQRSNDTEDDDKSGFFACYLLTSLCPRYKGHTYIG
FTVNPRRRIRQHNGELCSGAWRTKKKRPWEMVLCIHGFPTNVAALQFEWAWQHPVESLAV
RNAAVGFKSLGGLANKIKLAYTMLTLPAWNNLNLSVNFFSTKYTKHYAGCPTLPSHMRVH
IRSMDELPCYTEGYRDDEDDMFGFENDLSDDEEEPTKSFEDVMIPVLSYTNHHNNEEEAI
HVSGNENYEQSSCNNKDLWNDDKEPETIQVSVSADHRNNENEAICVSDDENNEQPACTNK
DTWDDDEEPETIPVHQNDEKEAICVSDDENYEPAACSNIPKRSFMDSGFNKMGCVGDKDG
PNTKISGSSGEVEVVDLFTPSPEYRIRKKKAVSVVCPEIIDLTESPICV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaagaaaggggcgtcaatcagaaaccctaattcactctaacggagaacaagaa
gatgatgaattcagagatcaacggtctaatgatacagaagacgacgataaatcaggcttc
ttcgcttgctatttgcttacgtcactctgccctagatacaaaggccacacctacatcggg
tttacggtgaacccacggcggcggatcaggcaacataatggggaattgtgcagtggtgcg
tggaggactaagaagaaacgtccgtgggaaatggtactctgcatacatggttttccaact
aacgttgctgcgcttcagtttgagtgggcttggcaacaccctgtggaatcacttgctgtt
agaaatgcagcagtgggttttaaatctcttggcgggcttgcaaataagatcaaactggct
tatacaatgctcacactaccagcctggaacaacttgaatttgagtgtgaactttttttca
acgaaatacacaaagcattatgctgggtgtcctacattacccagccacatgagggtacac
attcgttccatggatgagcttccatgttatacagaaggatatagagacgatgaagatgat
atgttcggatttgaaaacgatctatctgacgatgaagaggaacccacaaaatcatttgaa
gatgtaatgattccagttctttcttatacaaatcaccacaacaatgaagaagaagcaatt
catgtttcgggtaatgaaaattatgaacaatcatcctgcaataacaaggatttgtggaat
gatgataaagaaccggaaacaatacaagtttccgtctctgcggatcatcgaaacaatgaa
aacgaagcaatttgcgtttcagatgatgaaaataatgaacaaccagcgtgcacgaataaa
gatacgtgggatgatgatgaagaaccggaaacaataccagttcatcaaaacgatgaaaaa
gaagcaatttgcgtttcagatgatgaaaattatgaaccagcggcctgcagtaacatacct
aagagatcatttatggactcgggttttaataaaatgggttgtgttggtgataaagatgga
cccaacacgaagatttctggttctagtggtgaagttgaggtggtcgatttatttacccca
tcacccgaatatcgaattaggaagaaaaaagcggtttctgttgtatgtcctgagatcatt
gacttgacggagtcacccatatgtgtgtaa
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