Helianthus annuus (common sunflower): 110871606
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Entry
110871606 CDS
T05101
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00730
Thiamine metabolism
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
110871606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110871606
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
110871606
Ribosome biogenesis [BR:
han03009
]
Prokaryotic type
GTPases
110871606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_29
AAA_23
nSTAND1
AAA_16
AAA_22
AAA_21
SMC_N
Ras
Adeno_IVa2
Roc
Guanylate_kin
AAA_28
Dynamin_N
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
110871606
NCBI-ProteinID:
XP_021975997
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All DBs
Position
8:2406647..2412319
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AA seq
490 aa
AA seq
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MSSLSSSFLRHHHTPLIWTTVHRLNSSTFRSLSIAVCRSQNRENVSRKSQQPSKHLLKAR
DAVKQFSSLSPSLNAADKLHLSPDKAIGKVASAQANFMRVVVESQKSDEEHEKHEGHNGS
GVELLCVVRNLLKKIKRRVLVGDKVLVGSIDWNDRRGVIENVFERKTEVIDPPVANVDHL
LVLFSLDQPKPEEFSVTRFLVEAESTRIPVTLALNKAELVDKETVSLWKSKLRSWGYEPI
ICSVETKTGLDSLRFSLRDQTSVIVGPSGVGKSSLINALRSEHFRFGPAEVDDWPNSISG
SKWLEDQRVGEVSARSGRGKHTTRHVSLLPLSGGGYIADTPGFNQPSLLKVTKQSLALCF
PEVRKILSESHPSKCAFSNCLHLGEPGCLVKPDWERYQYYFQLLDEIKIREEFQLRTLGT
KREGDVRFKMGDMGIKQAEPRLEPKKHRRQSRKTTKQSFLNDLENELEEEDDESYLDDDP
IIRAMENEKQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactctcatcatccttcctccgccaccaccacacgccgctcatatggaccacc
gtacaccgcctaaactcctccactttccgttccctctcaatcgccgtttgccgtagccaa
aaccgcgaaaacgtgtccagaaagtcacaacaaccgagcaaacacctgctcaaagctcgc
gacgccgtgaaacagttctcgtcgctctcgccgtcgcttaacgccgccgataagctccac
ctgtcgccggataaagcgatcggaaaagtcgcgtcagctcaagcgaatttcatgcgtgtt
gtggttgaatcacagaaatcggacgaagaacatgaaaaacatgaaggacataacggatct
ggagttgaattgctgtgtgtggtgaggaacttgttaaagaagattaagaggagagttttg
gtaggggataaggtgttagtaggttcgattgattggaatgatagaagaggagtgatagag
aatgtgttcgagaggaaaactgaagtgattgatccgcctgtagcgaatgtggatcatctg
ctggttttgttctcgttagatcaaccgaaaccggaggagttttcggtcactaggtttttg
gttgaggctgagtcgactcggataccggttacacttgctttgaacaaggctgaattggta
gataaagagactgtgagtttatggaaatccaagcttcgcagctggggttatgagccaatc
atttgcagtgtcgagaccaaaacgggacttgattctctgcgattcagcttaagagaccag
acctctgtaattgtgggtccgagtggtgtaggaaagtccagtttgattaacgctttaaga
agcgaacactttcgttttgggcctgcagaagtggatgattggcctaactctatttcagga
agcaaatggcttgaagatcaacgagttggagaagtgtcggcaagaagtggcagaggaaag
cacacaactcgccatgtttctttgcttccattatctggtggaggatatatcgcagatact
cctggttttaatcaaccgagtctactgaaggttacaaaacagtctcttgcactatgcttc
ccagaggttcgaaaaattctttcggagagtcacccgtcgaagtgtgcgtttagtaattgt
ttgcatcttggggaaccagggtgccttgtgaaacccgactgggaaagatatcaatactat
ttccagttgcttgatgagatcaaaatcagagaagaatttcagttgcgaactctaggaacc
aaacgtgagggtgacgtcagattcaaaatgggagatatgggaatcaagcaagctgaaccg
cggctggagccgaagaaacatagaaggcaatcgcgtaagacgacaaaacagtctttccta
aatgacttggagaatgaacttgaagaagaagatgatgaaagctatttagatgatgatcca
atcatacgagcaatggagaatgaaaaacagtaa
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